RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 GARSP41250 739 aaKnown RBP4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 KIR2DL3P43628 341 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 FNTBP49356 437 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 ARFIP2P53365 341 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 POLE2P56282 527 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 AP2B1P63010 937 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 CBX3Q13185 183 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 ADRM1Q16186 407 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 C2orf76Q3KRA6 126 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 TCP11X2Q5H9J9 407 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 TTC38Q5R3I4 469 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 DEPDC1Q5TB30 811 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 PRAMEF9Q5VWM5 478 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 CAVIN1Q6NZI2 390 aaKnown RBP4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 OLFM4Q6UX06 510 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 ESPNLQ6ZVH7 1005 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 UNC13DQ70J99 1090 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 HTR3DQ70Z44 454 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 RNF44Q7L0R7 432 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 SCN4BQ8IWT1 228 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 VPS52Q8N1B4 723 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 TMEM57Q8N5G2 664 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 C10orf53Q8N6V4 93 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 VGLL2Q8N8G2 317 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 C3orf20Q8ND61 904 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 NEK9Q8TD19 979 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 SLC22A17Q8WUG5 538 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 ATP6V0A1Q93050 837 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 APOPT1Q96IL0 206 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 CLMNQ96JQ2 1002 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 TRAPPC9Q96Q05 1148 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 FDXACB1Q9BRP7 624 aaPredicted RBP4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 THUMPD3Q9BV44 507 aaKnown RBP4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 NT5C3AQ9H0P0 336 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 EPC1Q9H2F5 836 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 PDCL3Q9H2J4 239 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 POFUT1Q9H488 388 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 ST6GALNAC4Q9H4F1 302 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 CHODLQ9H9P2 273 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 TAS2R3Q9NYW6 316 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 STK26Q9P289 416 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 CACNG4Q9UBN1 327 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 EXTL2Q9UBQ6 330 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 ZMAT5Q9UDW3 170 aaKnown RBP4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 EXOC7Q9UPT5 735 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 MTO1Q9Y2Z2 717 aaKnown RBP4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 TMEM94Q12767 1356 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 A4D1N5 150 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 CCDC151A5D8V7 595 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 TRIM43BA6NCK2 446 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 A8MV72 311 aaPredicted RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 GRXCR1A8MXD5 290 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 H0YC42 278 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 PSMA7O14818 248 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 STX6O43752 255 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 RECQL4O94761 1208 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 FTCDO95954 541 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 PDHBP11177 359 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 TOP1P11387 765 aaKnown RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 UBL4AP11441 157 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 TNNT1P13805 278 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 NPPBP16860 134 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 PSMA4P25789 261 aaKnown RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 EPHA8P29322 1005 aaPredicted RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 GGT5P36269 586 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 PSMB10P40306 273 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 MCAMP43121 646 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 SULT1E1P49888 294 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 PTTG1IPP53801 180 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 YWHAHQ04917 246 aaPredicted RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 DCTN2Q13561 401 aaKnown RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 SPIDRQ14159 915 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 SEC23BQ15437 767 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 GPR68Q15743 365 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 PRICKLE4Q2TBC4 344 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 MPP7Q5T2T1 576 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 FAM69AQ5T7M9 428 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 STRIP1Q5VSL9 837 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 OLFML1Q6UWY5 402 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 MEX3BQ6ZN04 569 aaKnown RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 RUFY3Q7L099 469 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 PLPPR4Q7Z2D5 763 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 ADGRG6Q86SQ4 1221 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 METTL23Q86XA0 190 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 MICU3Q86XE3 530 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 GATAD2AQ86YP4 633 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 WDTC1Q8N5D0 677 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 AOPEPQ8N6M6 819 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 DENND6BQ8NEG7 585 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 MNS1Q8NEH6 495 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 FIBINQ8TAL6 211 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 METTL6Q8TCB7 284 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 ZNF384Q8TF68 577 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 CTNNBL1Q8WYA6 563 aaPredicted RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 TRIM43Q96BQ3 446 aaPredicted RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 SIPA1Q96FS4 1042 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 PDLIM5Q96HC4 596 aaKnown RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 NAF1Q96HR8 494 aaKnown RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 SPXQ9BT56 116 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms