RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 KRT79Q5XKE5 535 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 SPATC1Q76KD6 591 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 SRGAP1Q7Z6B7 1085 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 ADGRD2Q7Z7M1 963 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 ZNF410Q86VK4 478 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 ZNF280BQ86YH2 543 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 THNSL1Q8IYQ7 743 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 COLGALT1Q8NBJ5 622 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 MDGA1Q8NFP4 955 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 NEK9Q8TD19 979 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 LRRC15Q8TF66 581 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 POF1BQ8WVV4 589 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 AUTS2Q8WXX7 1259 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 DHRS4Q9BTZ2 278 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 TMEM117Q9H0C3 514 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 CXCL16Q9H2A7 254 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 ELAC1Q9H777 363 aaKnown RBP4.98□□□□□ -1.61
NUP54-206ENST00000508465 CHST12Q9NRB3 414 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 AGPAT5Q9NUQ2 364 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 MIOSQ9NXC5 875 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 DACT1Q9NYF0 836 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 SPG21Q9NZD8 308 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 DNAJB4Q9UDY4 337 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 MTMR6Q9Y217 621 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 SPTBN5Q9NRC6 3674 aaKnown RBP4.98□□□□□ -1.61
NUP54-206ENST00000508465 COL4A3Q01955 1670 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.97□□□□□ -1.61
NUP54-206ENST00000508465 ARL5CA6NH57 179 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 HIDE1A8MVS5 230 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 C5orf67F2Z3F1 127 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 F8W810 466 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 PDPK1O15530 556 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 ZC3H11AO75152 810 aaKnown RBP eCLIP4.97□□□□□ -1.61
NUP54-206ENST00000508465 DDHD2O94830 711 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 ERLIN2O94905 339 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 EYA4O95677 639 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 EDN1P05305 212 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 PLA2G4BP0C869 781 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 MYBP10242 640 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 CDK4P11802 303 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 NCLP19338 710 aaKnown RBP4.97□□□□□ -1.61
NUP54-206ENST00000508465 PDCP20941 246 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 CA8P35219 290 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 PRPHP41219 470 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 UBA7P41226 1012 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 NRIP1P48552 1158 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 ALDH7A1P49419 539 aaKnown RBP4.97□□□□□ -1.61
NUP54-206ENST00000508465 PEX3P56589 373 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 ADAM8P78325 824 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 NCBP1Q09161 790 aaKnown RBP4.97□□□□□ -1.61
NUP54-206ENST00000508465 ORC2Q13416 577 aaPredicted RBP4.97□□□□□ -1.61
NUP54-206ENST00000508465 KARSQ15046 597 aaKnown RBP4.97□□□□□ -1.61
NUP54-206ENST00000508465 TM4SF20Q53R12 229 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 CATSPEREQ5SY80 951 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 HECTD2Q5U5R9 776 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 PLPP4Q5VZY2 271 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 RINT1Q6NUQ1 792 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 OLFML1Q6UWY5 402 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 C1orf186Q6ZWK4 172 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 TAS1R1Q7RTX1 841 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 MRPL10Q7Z7H8 261 aaKnown RBP4.97□□□□□ -1.61
NUP54-206ENST00000508465 DAW1Q8N136 415 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 MCPH1Q8NEM0 835 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 DEPTORQ8TB45 409 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 ST8SIA2Q92186 375 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 EPSTI1Q96J88 318 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 CDK5RAP3Q96JB5 506 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 MAGEB10Q96LZ2 347 aaPredicted RBP4.97□□□□□ -1.61
NUP54-206ENST00000508465 ZNF558Q96NG5 402 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 GAD1Q99259 594 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 APOL5Q9BWW9 433 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 RAB34Q9BZG1 259 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 NXF3Q9H4D5 531 aaKnown RBP4.97□□□□□ -1.61
NUP54-206ENST00000508465 TLE6Q9H808 572 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 UBE2ZQ9H832 354 aaPredicted RBP4.97□□□□□ -1.61
NUP54-206ENST00000508465 THEGQ9P2T0 379 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 NCDNQ9UBB6 729 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 CACNG4Q9UBN1 327 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 SORCS3Q9UPU3 1222 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 COQ6Q9Y2Z9 468 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 IPPQ9Y573 584 aa4.97□□□□□ -1.61
NUP54-206ENST00000508465 TCF20Q9UGU0 1960 aaKnown RBP4.96□□□□□ -1.61
NUP54-206ENST00000508465 COL4A6Q14031 1691 aa4.96□□□□□ -1.61
NUP54-206ENST00000508465 A0A1B0GUA9 196 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 K7ERI5 159 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 LAD1O00515 517 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 SLC16A4O15374 487 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 STX6O43752 255 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 TOX4O94842 621 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 ALDH2P05091 517 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 PRKCBP05771 671 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 HSP90AA1P07900 732 aaKnown RBP4.96□□□□□ -1.62
NUP54-206ENST00000508465 GALTP07902 379 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 LAG3P18627 525 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 MLH1P40692 756 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 NPTX2P47972 431 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 SLC11A1P49279 550 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 OSTNP61366 133 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 SLC6A3Q01959 620 aa4.96□□□□□ -1.62
NUP54-206ENST00000508465 KRT17Q04695 432 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms