RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 USP37Q86T82 979 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 JAZF1Q86VZ6 243 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 ARID3BQ8IVW6 561 aaPredicted RBP7.27□□□□□ -1.25
NR1I3-224ENST00000507215 NETO2Q8NC67 525 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 ZSWIM2Q8NEG5 633 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 KCNN1Q92952 543 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 PSMG2Q969U7 264 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 ACAP3Q96P50 834 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 TASP1Q9H6P5 420 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 RBM12Q9NTZ6 932 aaKnown RBP7.27□□□□□ -1.25
NR1I3-224ENST00000507215 CEP72Q9P209 647 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 ANKFY1Q9P2R3 1169 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 CACNG4Q9UBN1 327 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 EVLQ9UI08 416 aaPredicted RBP7.27□□□□□ -1.25
NR1I3-224ENST00000507215 YIPF1Q9Y548 306 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 LNP1A1A4G5 178 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 ARHGEF35A5YM69 484 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 C4orf47A7E2U8 309 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 K7ERI5 159 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 M0QZQ0 153 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 NEMFO60524 1076 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 MCF2P10911 925 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 SCP2P22307 547 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 BRCC3P46736 316 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 TUFMP49411 452 aaKnown RBP7.26□□□□□ -1.25
NR1I3-224ENST00000507215 CCT2P78371 535 aaKnown RBP7.26□□□□□ -1.25
NR1I3-224ENST00000507215 CREB5Q02930 508 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 GPR17Q13304 367 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 BYSLQ13895 437 aaKnown RBP7.26□□□□□ -1.25
NR1I3-224ENST00000507215 PDGFRLQ15198 375 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 KYAT1Q16773 422 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 GLRA4Q5JXX5 417 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 CC2D1AQ6P1N0 951 aaPredicted RBP7.26□□□□□ -1.25
NR1I3-224ENST00000507215 RUFY3Q7L099 469 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 TMC8Q8IU68 726 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 C2orf15Q8WU43 125 aaKnown RBP7.26□□□□□ -1.25
NR1I3-224ENST00000507215 PTPRN2Q92932 1015 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 POLR3CQ9BUI4 534 aaPredicted RBP7.26□□□□□ -1.25
NR1I3-224ENST00000507215 SCNM1Q9BWG6 230 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 MRPL4Q9BYD3 311 aaKnown RBP7.26□□□□□ -1.25
NR1I3-224ENST00000507215 C17orf75Q9HAS0 396 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 PLEKHA5Q9HAU0 1116 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 GTSE1Q9NYZ3 720 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 CITO14578 2027 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 TRIP11Q15643 1979 aa7.26□□□□□ -1.25
NR1I3-224ENST00000507215 PCNX2A6NKB5 2137 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 NUP205Q92621 2012 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 ESYT3A0FGR9 886 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 H7BY64 318 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 TAF4O00268 1085 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 ABLIM1O14639 778 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 EXTL3O43909 919 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 TYMPP19971 482 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 CYP3A5P20815 502 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 RPA1P27694 616 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 KRT2P35908 639 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 AVPR1AP37288 418 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 TXKP42681 527 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 RUNX3Q13761 415 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 ZNF268Q14587 947 aaPredicted RBP7.25□□□□□ -1.25
NR1I3-224ENST00000507215 TAF12Q16514 161 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 ZNF568Q3ZCX4 644 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 ZC3H12BQ5HYM0 836 aaKnown RBP7.25□□□□□ -1.25
NR1I3-224ENST00000507215 GPR158Q5T848 1215 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 PMS2CLQ68D20 193 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 ARMCX5Q6P1M9 558 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 DNAJB7Q7Z6W7 309 aaPredicted RBP7.25□□□□□ -1.25
NR1I3-224ENST00000507215 CILP2Q8IUL8 1156 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 KIAA1958Q8N8K9 716 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 PIGOQ8TEQ8 1089 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 CLUHP3Q96NS8 147 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 ZFYVE21Q9BQ24 234 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 TIPINQ9BVW5 301 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 NUSAP1Q9BXS6 441 aaKnown RBP7.25□□□□□ -1.25
NR1I3-224ENST00000507215 KRTAP9-2Q9BYQ4 174 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 TM6SF1Q9BZW5 370 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 NCOA5Q9HCD5 579 aaKnown RBP7.25□□□□□ -1.25
NR1I3-224ENST00000507215 RALYQ9UKM9 306 aaKnown RBP7.25□□□□□ -1.25
NR1I3-224ENST00000507215 DSEQ9UL01 958 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 PCDHA9Q9Y5H5 950 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 PCDHA5Q9Y5H7 936 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 SNX14Q9Y5W7 946 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 CYP46A1Q9Y6A2 500 aa7.25□□□□□ -1.25
NR1I3-224ENST00000507215 WDFY3Q8IZQ1 3526 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 SETXQ7Z333 2677 aaKnown RBP7.24□□□□□ -1.25
NR1I3-224ENST00000507215 GCN1Q92616 2671 aaKnown RBP7.24□□□□□ -1.25
NR1I3-224ENST00000507215 NBEAQ8NFP9 2946 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 ACACAQ13085 2346 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 ITPR1Q14643 2758 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 FREM2Q5SZK8 3169 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 H0YCG3 227 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 I3L4J1 428 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 PPP1R12AO14974 1030 aaPredicted RBP7.24□□□□□ -1.25
NR1I3-224ENST00000507215 TOM1L1O75674 476 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 ALDH1A2O94788 518 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 MED14OSP0DP75 135 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 GABRR2P28476 465 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 LRPAP1P30533 357 aa7.24□□□□□ -1.25
NR1I3-224ENST00000507215 AARSP49588 968 aaKnown RBP eCLIP7.24□□□□□ -1.25
NR1I3-224ENST00000507215 PDE6CP51160 858 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms