RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 HS3ST4Q9Y661 456 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 CKAP5Q14008 2032 aa18.82■□□□□ 0.6
NPHP4-210ENST00000506941 PRRT4C9JH25 899 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 MYBL1P10243 752 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 NUBP1P53384 320 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 ZNF252P-AS1Q0IIN9 211 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 SLC18A3Q16572 532 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 FBXO43Q4G163 708 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 ARTNQ5T4W7 220 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 DCUN1D2Q6PH85 259 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 STRADAQ7RTN6 431 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 C14orf80Q86SX3 495 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 C1orf210Q8IVY1 113 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 TRIM11Q96F44 468 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 THAP2Q9H0W7 228 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 NHEJ1Q9H9Q4 299 aaPredicted RBP18.81■□□□□ 0.6
NPHP4-210ENST00000506941 POLR3BQ9NW08 1133 aaPredicted RBP18.81■□□□□ 0.6
NPHP4-210ENST00000506941 STIM2Q9P246 746 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 MYO1AQ9UBC5 1043 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 HCN2Q9UL51 889 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 SLC27A6Q9Y2P4 619 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 MYO15AQ9UKN7 3530 aa18.81■□□□□ 0.6
NPHP4-210ENST00000506941 DMDP11532 3685 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 TBC1D3BA6NDS4 549 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 TMEM191CA6NGB0 347 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 F5H5T6 163 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 COL9A1P20849 921 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 TNFRSF4P43489 277 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 KIR2DL1P43626 348 aaPredicted RBP18.8■□□□□ 0.6
NPHP4-210ENST00000506941 IRAK1P51617 712 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 TCF15Q12870 199 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 AUHQ13825 339 aaKnown RBP18.8■□□□□ 0.6
NPHP4-210ENST00000506941 GEN1Q17RS7 908 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 C10orf76Q5T2E6 689 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 MPP7Q5T2T1 576 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 EMC10Q5UCC4 262 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 FBXL22Q6P050 247 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 CIR1Q86X95 450 aaPredicted RBP18.8■□□□□ 0.6
NPHP4-210ENST00000506941 SPEM1Q8N4L4 309 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 RPLP0P6Q8NHW5 317 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 USP33Q8TEY7 942 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 IGSF8Q969P0 613 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 ARHGEF26Q96DR7 871 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 CNPY3Q9BT09 278 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 IER2Q9BTL4 223 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 PACSIN1Q9BY11 444 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 SLC2A11Q9BYW1 496 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 SIK2Q9H0K1 926 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 ZDHHC4Q9NPG8 344 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 PAXBP1Q9Y5B6 917 aa18.8■□□□□ 0.6
NPHP4-210ENST00000506941 ANKRD62A6NC57 917 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 HLA-FP30511 346 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 HOXC13P31276 330 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 GALCP54803 685 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 SATB1Q01826 763 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 ANGPT1Q15389 498 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 PREPLQ4J6C6 727 aaPredicted RBP18.79■□□□□ 0.6
NPHP4-210ENST00000506941 C2orf27AQ580R0 203 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 MAMSTRQ6ZN01 415 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 ZNF683Q8IZ20 524 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 CCDC185Q8N715 623 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 DEF6Q9H4E7 631 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 PRMT8Q9NR22 394 aaPredicted RBP18.79■□□□□ 0.6
NPHP4-210ENST00000506941 SPTLC3Q9NUV7 552 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 TMEM51Q9NW97 253 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 VANGL2Q9ULK5 521 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 HCN4Q9Y3Q4 1203 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 SCINQ9Y6U3 715 aa18.79■□□□□ 0.6
NPHP4-210ENST00000506941 CHURC1-FNTBB4DL54 471 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 AKR1B10O60218 316 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 CYP1A2P05177 515 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 CDC25BP30305 580 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 TIE1P35590 1138 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 MTA1Q13330 715 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 TMEM215Q68D42 235 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 ANKS1BQ7Z6G8 1248 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 LMLNQ96KR4 655 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 MAGEB5Q9BZ81 275 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 ABCB8Q9NUT2 735 aa18.78■□□□□ 0.6
NPHP4-210ENST00000506941 TYW5A2RUC4 315 aaKnown RBP18.77■□□□□ 0.6
NPHP4-210ENST00000506941 LAMTOR5O43504 91 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 LUC7L3O95232 432 aaKnown RBP18.77■□□□□ 0.6
NPHP4-210ENST00000506941 TDGF1P13385 188 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 PSMA2P25787 234 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 CD70P32970 193 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 ADRA1BP35368 520 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 C5orf22Q49AR2 442 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 FSCBQ5H9T9 825 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 EGFLAMQ63HQ2 1017 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 TSSK4Q6SA08 328 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 KIAA0907Q7Z7F0 614 aaPredicted RBP18.77■□□□□ 0.6
NPHP4-210ENST00000506941 MFN1Q8IWA4 741 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 CARNMT1Q8N4J0 409 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 ALLCQ8N6M5 410 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 ARFGAP1Q8N6T3 406 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.77■□□□□ 0.6
NPHP4-210ENST00000506941 IL17RCQ8NAC3 791 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 FIBINQ8TAL6 211 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 FNIP1Q8TF40 1166 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 C1orf74Q96LT6 269 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms