RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ARHGAP20Q9P2F6 1191 aa20.58■□□□□ 0.89
SNX25-204ENST00000506896 SLC27A6Q9Y2P4 619 aa20.58■□□□□ 0.89
SNX25-204ENST00000506896 MYO18AQ92614 2054 aaKnown RBP20.57■□□□□ 0.88
SNX25-204ENST00000506896 GOLGA6L7A0A1B0GV03 622 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 TBC1D3BA6NDS4 549 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 K7EQS6 105 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 TSPAN3O60637 253 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 ENDOD1O94919 500 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 PLEKP08567 350 aaPredicted RBP20.57■□□□□ 0.88
SNX25-204ENST00000506896 TFE3P19532 575 aaPredicted RBP20.57■□□□□ 0.88
SNX25-204ENST00000506896 HOXD9P28356 352 aaPredicted RBP20.57■□□□□ 0.88
SNX25-204ENST00000506896 HOXC13P31276 330 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 RFC1P35251 1148 aaPredicted RBP20.57■□□□□ 0.88
SNX25-204ENST00000506896 ZNF75DP51815 510 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 MRPS21P82921 87 aaKnown RBP20.57■□□□□ 0.88
SNX25-204ENST00000506896 DMWDQ09019 674 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 TBX2Q13207 712 aaPredicted RBP20.57■□□□□ 0.88
SNX25-204ENST00000506896 CCDC14Q49A88 953 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 HSF5Q4G112 596 aaPredicted RBP20.57■□□□□ 0.88
SNX25-204ENST00000506896 PPP1R15BQ5SWA1 713 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 PLEKHA7Q6IQ23 1121 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 RFWD3Q6PCD5 774 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 DCUN1D2Q6PH85 259 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 STRADAQ7RTN6 431 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 JOSD2Q8TAC2 188 aa20.57■□□□□ 0.88
SNX25-204ENST00000506896 SSU72P8A0A1W2PR75 194 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 AKR1B15C9JRZ8 316 aaPredicted RBP20.56■□□□□ 0.88
SNX25-204ENST00000506896 F5H5T6 163 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 CISD3P0C7P0 127 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 TACR2P21452 398 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 GPD1P21695 349 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 ZNF143P52747 638 aaPredicted RBP20.56■□□□□ 0.88
SNX25-204ENST00000506896 ATP11AP98196 1134 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 TTC39BQ5VTQ0 682 aaPredicted RBP20.56■□□□□ 0.88
SNX25-204ENST00000506896 RNF43Q68DV7 783 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 WDR59Q6PJI9 974 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 CHSY1Q86X52 802 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 ACDQ96AP0 544 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 P2RY11Q96G91 374 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 MCEEQ96PE7 176 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 ADAM33Q9BZ11 813 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 TKTL2Q9H0I9 626 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 EPC1Q9H2F5 836 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 XPO7Q9UIA9 1087 aaKnown RBP20.56■□□□□ 0.88
SNX25-204ENST00000506896 SCINQ9Y6U3 715 aa20.56■□□□□ 0.88
SNX25-204ENST00000506896 A0A087X0T9 212 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 FAM228BP0C875 321 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 MESP2Q0VG99 397 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 MAPK8IP2Q13387 824 aaPredicted RBP20.55■□□□□ 0.88
SNX25-204ENST00000506896 MAMLD1Q13495 774 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 E2F5Q15329 346 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 RAP1GAP2Q684P5 730 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 ALKBH5Q6P6C2 394 aaKnown RBP20.55■□□□□ 0.88
SNX25-204ENST00000506896 CCDC117Q8IWD4 279 aaPredicted RBP20.55■□□□□ 0.88
SNX25-204ENST00000506896 LGI2Q8N0V4 545 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 USP33Q8TEY7 942 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 CENPIQ92674 756 aaPredicted RBP20.55■□□□□ 0.88
SNX25-204ENST00000506896 ZNF653Q96CK0 615 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 PRICKLE1Q96MT3 831 aaPredicted RBP20.55■□□□□ 0.88
SNX25-204ENST00000506896 PRMT1Q99873 361 aaKnown RBP20.55■□□□□ 0.88
SNX25-204ENST00000506896 DEF6Q9H4E7 631 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 MRPL47Q9HD33 250 aaKnown RBP20.55■□□□□ 0.88
SNX25-204ENST00000506896 CNOT8Q9UFF9 292 aaKnown RBP20.55■□□□□ 0.88
SNX25-204ENST00000506896 STARD13Q9Y3M8 1113 aa20.55■□□□□ 0.88
SNX25-204ENST00000506896 TBL1XO60907 577 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 PAGE1O75459 146 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 GJB6O95452 261 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 EIF4A3P38919 411 aaKnown RBP20.54■□□□□ 0.88
SNX25-204ENST00000506896 FNTBP49356 437 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 ADKP55263 362 aaKnown RBP20.54■□□□□ 0.88
SNX25-204ENST00000506896 EIF4HQ15056 248 aaKnown RBP20.54■□□□□ 0.88
SNX25-204ENST00000506896 CDO1Q16878 200 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 ARL13BQ3SXY8 428 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 RABGAP1LQ5R372 815 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 C10orf76Q5T2E6 689 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 TRMT11Q7Z4G4 463 aaKnown RBP20.54■□□□□ 0.88
SNX25-204ENST00000506896 ANKS1BQ7Z6G8 1248 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 RPLP0P6Q8NHW5 317 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 C1orf74Q96LT6 269 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 HAPLN3Q96S86 360 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 CNPY3Q9BT09 278 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 HS3ST4Q9Y661 456 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 EML5Q05BV3 1969 aa20.54■□□□□ 0.88
SNX25-204ENST00000506896 ANTXRLA6NF34 631 aa20.53■□□□□ 0.88
SNX25-204ENST00000506896 TRIM24O15164 1050 aa20.53■□□□□ 0.88
SNX25-204ENST00000506896 ADCY5O95622 1261 aa20.53■□□□□ 0.88
SNX25-204ENST00000506896 CHRM1P11229 460 aaPredicted RBP20.53■□□□□ 0.88
SNX25-204ENST00000506896 KIR2DL1P43626 348 aaPredicted RBP20.53■□□□□ 0.88
SNX25-204ENST00000506896 SGSHP51688 502 aa20.53■□□□□ 0.88
SNX25-204ENST00000506896 SEC13P55735 322 aa20.53■□□□□ 0.88
SNX25-204ENST00000506896 RPL7AP62424 266 aaKnown RBP20.53■□□□□ 0.88
SNX25-204ENST00000506896 RPS24P62847 133 aaKnown RBP20.53■□□□□ 0.88
SNX25-204ENST00000506896 AUHQ13825 339 aaKnown RBP20.53■□□□□ 0.88
SNX25-204ENST00000506896 SLC18A3Q16572 532 aa20.53■□□□□ 0.88
SNX25-204ENST00000506896 C15orf59Q2T9L4 293 aaPredicted RBP20.53■□□□□ 0.88
SNX25-204ENST00000506896 SYT13Q7L8C5 426 aa20.53■□□□□ 0.88
SNX25-204ENST00000506896 LONP2Q86WA8 852 aa20.53■□□□□ 0.88
SNX25-204ENST00000506896 FAM172AQ8WUF8 416 aa20.53■□□□□ 0.88
SNX25-204ENST00000506896 POLR3BQ9NW08 1133 aaPredicted RBP20.53■□□□□ 0.88
SNX25-204ENST00000506896 CCDC163A0A0D9SF12 145 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms