RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 TFB1MQ8WVM0 346 aaKnown RBP9.86□□□□□ -0.83
PHF3-208ENST00000506783 HDAC11Q96DB2 347 aa9.86□□□□□ -0.83
PHF3-208ENST00000506783 CDRT15Q96T59 188 aa9.86□□□□□ -0.83
PHF3-208ENST00000506783 HBEGFQ99075 208 aa9.86□□□□□ -0.83
PHF3-208ENST00000506783 SMARCAD1Q9H4L7 1026 aa9.86□□□□□ -0.83
PHF3-208ENST00000506783 NRDE2Q9H7Z3 1164 aa9.86□□□□□ -0.83
PHF3-208ENST00000506783 RHBDL2Q9NX52 303 aa9.86□□□□□ -0.83
PHF3-208ENST00000506783 ERAP1Q9NZ08 941 aa9.86□□□□□ -0.83
PHF3-208ENST00000506783 SLC24A2Q9UI40 661 aa9.86□□□□□ -0.83
PHF3-208ENST00000506783 CPSF3Q9UKF6 684 aaKnown RBP9.86□□□□□ -0.83
PHF3-208ENST00000506783 MTO1Q9Y2Z2 717 aaKnown RBP9.86□□□□□ -0.83
PHF3-208ENST00000506783 EEF2KO00418 725 aaKnown RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 RAG1P15918 1043 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 STIP1P31948 543 aaKnown RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 GPD2P43304 727 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 AFF1P51825 1210 aaKnown RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 CSE1LP55060 971 aaKnown RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 AP2B1P63010 937 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 WSCD1Q658N2 575 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 PIGZQ86VD9 579 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 MIB1Q86YT6 1006 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 PLD6Q8N2A8 252 aaKnown RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 SH3TC2Q8TF17 1288 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 UTP6Q9NYH9 597 aaKnown RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 CCDC167Q9P0B6 97 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 MFSD11O43934 449 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 MAFO75444 373 aaPredicted RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 MTA2O94776 668 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 OR6B1O95007 311 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 PARNO95453 639 aaKnown RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 CYP2C9P11712 490 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 MX2P20592 715 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 PEX2P28328 305 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 CDH13P55290 713 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 TPI1P60174 286 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 SLC34A1Q06495 639 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 MCL1Q07820 350 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 NSUN2Q08J23 767 aaKnown RBP eCLIP9.85□□□□□ -0.83
PHF3-208ENST00000506783 SNX32Q86XE0 403 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 PQLC3Q8N755 202 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 NRG4Q8WWG1 115 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 ZMAT2Q96NC0 199 aaKnown RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 GPR20Q99678 358 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 TIPINQ9BVW5 301 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 XYLT2Q9H1B5 865 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 XPNPEP3Q9NQH7 507 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 BFARQ9NZS9 450 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 SLC7A8Q9UHI5 535 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 BARX2Q9UMQ3 279 aaPredicted RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 ARHGAP26Q9UNA1 814 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 A0A0C4DFX4 3053 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 C2CD2LO14523 706 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 ATP5HO75947 161 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 LYPLA2O95372 231 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 CYP3A5P20815 502 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 MPSTP25325 297 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 CCNFP41002 786 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 HADHBP55084 474 aaKnown RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 TMED1Q13445 227 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 MOGSQ13724 837 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 GALNTL6Q49A17 601 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 SLC45A4Q5BKX6 768 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 EFHC2Q5JST6 749 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 ARMCX2Q7L311 632 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 HTR3CQ8WXA8 447 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 P2RY11Q96G91 374 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 SLC39A3Q9BRY0 314 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 PHACTR1Q9C0D0 580 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 TRPV6Q9H1D0 765 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 LRMDAQ9H2I8 198 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 YY1AP1Q9H869 796 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 KANSL3Q9P2N6 904 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 GGA2Q9UJY4 613 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 RUVBL2Q9Y230 463 aaKnown RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 CRYL1Q9Y2S2 319 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 MAFBQ9Y5Q3 323 aaPredicted RBP9.85□□□□□ -0.83
PHF3-208ENST00000506783 ATRNL1Q5VV63 1379 aa9.85□□□□□ -0.83
PHF3-208ENST00000506783 A0A096LPK6 155 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 BEST1O76090 585 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 MUTP22033 750 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 CES1P23141 567 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 ZNF143P52747 638 aaPredicted RBP9.84□□□□□ -0.83
PHF3-208ENST00000506783 COPAP53621 1224 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 TBL3Q12788 808 aaKnown RBP9.84□□□□□ -0.83
PHF3-208ENST00000506783 CSHL1Q14406 222 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 FUT11Q495W5 492 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 PDPK2PQ6A1A2 396 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 ADGRD1Q6QNK2 874 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 PARP8Q8N3A8 854 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 ZNF781Q8N8C0 355 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 ACVR1CQ8NER5 493 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 OR6J1Q8NGC5 347 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 ESAMQ96AP7 390 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 LRGUKQ96M69 825 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 EBF3Q9H4W6 596 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 SLC15A5A6NIM6 579 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 MSI1O43347 362 aaKnown RBP9.84□□□□□ -0.83
PHF3-208ENST00000506783 B3GAT3O94766 335 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 STBD1O95210 358 aa9.84□□□□□ -0.83
PHF3-208ENST00000506783 LTFP02788 710 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms