RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 AGTR2P50052 363 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 TAS2R50P59544 299 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 EFR3AQ14156 821 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 SERPINA13PQ6UXR4 307 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 TRIM72Q6ZMU5 477 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 SIMC1Q8NDZ2 872 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 GPR150Q8NGU9 434 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 BBC3Q96PG8 261 aaPredicted RBP6.65□□□□□ -1.34
HERC4-213ENST00000506515 DUSP26Q9BV47 211 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 RMI1Q9H9A7 625 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 ASIC5Q9NY37 505 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 SLC17A6Q9P2U8 582 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 TLK1Q9UKI8 766 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 ADAM21Q9UKJ8 722 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 FANCAO15360 1455 aa6.65□□□□□ -1.35
HERC4-213ENST00000506515 DENND4BO75064 1496 aaPredicted RBP6.65□□□□□ -1.35
HERC4-213ENST00000506515 STX16-NPEPL1H3BU86 382 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 STX16O14662 325 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 GCATO75600 419 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 RHOBTB3O94955 611 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 SLC3A2P08195 630 aaKnown RBP6.64□□□□□ -1.35
HERC4-213ENST00000506515 RCAN1P53805 252 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 CACNA2D1P54289 1103 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 WDR5P61964 334 aaKnown RBP6.64□□□□□ -1.35
HERC4-213ENST00000506515 ZXDAP98168 799 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 HOXA4Q00056 320 aaPredicted RBP6.64□□□□□ -1.35
HERC4-213ENST00000506515 GAB1Q13480 694 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 FHL2Q14192 279 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 TMEM65Q6PI78 240 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 KYAT3Q6YP21 454 aaKnown RBP6.64□□□□□ -1.35
HERC4-213ENST00000506515 DCDC5Q6ZRR9 648 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 ANKS1BQ7Z6G8 1248 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 MRGPRGQ86SM5 289 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 LDLRAD3Q86YD5 345 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 LINC01465Q8N7H1 131 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 FSIP1Q8NA03 581 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 CLEC4CQ8WTT0 213 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 AKAP1Q92667 903 aaKnown RBP eCLIP6.64□□□□□ -1.35
HERC4-213ENST00000506515 MAELQ96JY0 434 aaKnown RBP6.64□□□□□ -1.35
HERC4-213ENST00000506515 CCDC17Q96LX7 622 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 PLEKHA2Q9HB19 425 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 NOD2Q9HC29 1040 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 IFT80Q9P2H3 777 aaPredicted RBP6.64□□□□□ -1.35
HERC4-213ENST00000506515 RCE1Q9Y256 329 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 CRYL1Q9Y2S2 319 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 KIF21BO75037 1637 aa6.64□□□□□ -1.35
HERC4-213ENST00000506515 MBD3L5A6NJ08 208 aaPredicted RBP6.63□□□□□ -1.35
HERC4-213ENST00000506515 TISP43B9A030 160 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 EYA2O00167 538 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 KIAA0556O60303 1618 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 JTBO76095 146 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 FOXL2P58012 376 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 TLE3Q04726 772 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 KLF10Q13118 480 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 KCNB1Q14721 858 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 CNGA3Q16281 694 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 BCORL1Q5H9F3 1711 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 IQSEC2Q5JU85 1478 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 OLFML1Q6UWY5 402 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 KIAA1324Q6UXG2 1013 aaKnown RBP6.63□□□□□ -1.35
HERC4-213ENST00000506515 HERVK_113Q902F9 699 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 KAZALD1Q96I82 304 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 UROC1Q96N76 676 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 PIGSQ96S52 555 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 KLK15Q9H2R5 256 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 ALG13Q9NP73 1137 aaKnown RBP6.63□□□□□ -1.35
HERC4-213ENST00000506515 TMLHEQ9NVH6 421 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 PDP2Q9P2J9 529 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 ING1Q9UK53 422 aaPredicted RBP6.63□□□□□ -1.35
HERC4-213ENST00000506515 DNAJC16Q9Y2G8 782 aa6.63□□□□□ -1.35
HERC4-213ENST00000506515 TTC34A8MYJ7 566 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 SEPT4O43236 478 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 KAT7O95251 611 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 ALDOAP04075 364 aaKnown RBP6.62□□□□□ -1.35
HERC4-213ENST00000506515 CYP3A4P08684 503 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 CYP2D6P10635 497 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 PROZP22891 400 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 SLC8A1P32418 973 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 PCP4P48539 62 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 MCM2P49736 904 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 VPS41P49754 854 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 UBE3AQ05086 875 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 DCTN1Q14203 1278 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 DLGAP5Q15398 846 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 CTXN3Q4LDR2 81 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 AWAT1Q58HT5 328 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 ZNF484Q5JVG2 852 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 JAKMIP3Q5VZ66 844 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 RASGRP2Q7LDG7 609 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 ARHGEF25Q86VW2 580 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 SLC2A12Q8TD20 617 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 REPS1Q96D71 796 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 KTI12Q96EK9 354 aaPredicted RBP6.62□□□□□ -1.35
HERC4-213ENST00000506515 RBM17Q96I25 401 aaKnown RBP6.62□□□□□ -1.35
HERC4-213ENST00000506515 TWNKQ96RR1 684 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 TIMP4Q99727 224 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 ARHGAP39Q9C0H5 1083 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 PDE11AQ9HCR9 933 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 PGAP2Q9UHJ9 254 aa6.62□□□□□ -1.35
HERC4-213ENST00000506515 GJD2Q9UKL4 321 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms