RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 NTSR1P30989 418 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 SGSHP51688 502 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 CRY1Q16526 586 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 GEN1Q17RS7 908 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 SARM1Q6SZW1 724 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 STRADAQ7RTN6 431 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 WDR5BQ86VZ2 330 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 VSTM4Q8IW00 320 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 CCDC33Q8N5R6 958 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 EMC1Q8N766 993 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 RXFP2Q8WXD0 754 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 P2RY11Q96G91 374 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 HHIPQ96QV1 700 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 CIPCQ9C0C6 399 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 TKTL2Q9H0I9 626 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 ABCB8Q9NUT2 735 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 C2orf42Q9NWW7 574 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 STIM2Q9P246 746 aa17.26■□□□□ 0.35
SNCA-209ENST00000506244 XPO7Q9UIA9 1087 aaKnown RBP17.26■□□□□ 0.35
SNCA-209ENST00000506244 TMCO5BA8MYB1 307 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 PRRT4C9JH25 899 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 H0Y626 953 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 ZBTB24O43167 697 aaPredicted RBP17.25■□□□□ 0.35
SNCA-209ENST00000506244 LILRB5O75023 590 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 PAGE1O75459 146 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 LUC7L3O95232 432 aaKnown RBP17.25■□□□□ 0.35
SNCA-209ENST00000506244 MYBL1P10243 752 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 CHRM1P11229 460 aaPredicted RBP17.25■□□□□ 0.35
SNCA-209ENST00000506244 PABPC1P11940 636 aaKnown RBP17.25■□□□□ 0.35
SNCA-209ENST00000506244 HOXB2P14652 356 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 GPD1P21695 349 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 HLA-FP30511 346 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 CASP14P31944 242 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 OXCT1P55809 520 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 RPS24P62847 133 aaKnown RBP17.25■□□□□ 0.35
SNCA-209ENST00000506244 ATP11AP98196 1134 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 TSR1Q2NL82 804 aaKnown RBP17.25■□□□□ 0.35
SNCA-209ENST00000506244 ARL13BQ3SXY8 428 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 EGFLAMQ63HQ2 1017 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 HEATR6Q6AI08 1181 aaKnown RBP17.25■□□□□ 0.35
SNCA-209ENST00000506244 DCUN1D2Q6PH85 259 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 BNIPLQ7Z465 357 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 CARNMT1Q8N4J0 409 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 OLIG1Q8TAK6 271 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 FIBINQ8TAL6 211 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 RPRD1AQ96P16 312 aaPredicted RBP17.25■□□□□ 0.35
SNCA-209ENST00000506244 MCEEQ96PE7 176 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 PRMT1Q99873 361 aaKnown RBP17.25■□□□□ 0.35
SNCA-209ENST00000506244 ANP32EQ9BTT0 268 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 PARVAQ9NVD7 372 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 ELOVL2Q9NXB9 296 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 EBF1Q9UH73 591 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 CLEC4EQ9ULY5 219 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 SCINQ9Y6U3 715 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 ATG2BQ96BY7 2078 aa17.25■□□□□ 0.35
SNCA-209ENST00000506244 SGK1O00141 431 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 RTN2O75298 545 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 ENDOD1O94919 500 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 MOCS3O95396 460 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 ATP5BP06576 529 aaKnown RBP17.24■□□□□ 0.35
SNCA-209ENST00000506244 SKILP12757 684 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 TFE3P19532 575 aaPredicted RBP17.24■□□□□ 0.35
SNCA-209ENST00000506244 RRM1P23921 792 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 FNTBP49356 437 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 AUHQ13825 339 aaKnown RBP17.24■□□□□ 0.35
SNCA-209ENST00000506244 STARD3Q14849 445 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 CDO1Q16878 200 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 EMC10Q5UCC4 262 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 HGSNATQ68CP4 663 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 TRNP1Q6NT89 227 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 LRRC31Q6UY01 552 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 CHST9Q7L1S5 443 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 PHLDB2Q86SQ0 1253 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 JOSD2Q8TAC2 188 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 GABRG3Q99928 467 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNCA-209ENST00000506244 ADAM33Q9BZ11 813 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 TRIM5Q9C035 493 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 ZNHIT6Q9NWK9 470 aaKnown RBP17.24■□□□□ 0.35
SNCA-209ENST00000506244 TAS2R14Q9NYV8 317 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 CALCOCO1Q9P1Z2 691 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 HS3ST4Q9Y661 456 aa17.24■□□□□ 0.35
SNCA-209ENST00000506244 DDX3XO00571 662 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNCA-209ENST00000506244 AXIN1O15169 862 aa17.23■□□□□ 0.35
SNCA-209ENST00000506244 ADAM23O75077 832 aa17.23■□□□□ 0.35
SNCA-209ENST00000506244 ADCY5O95622 1261 aa17.23■□□□□ 0.35
SNCA-209ENST00000506244 LMNAP02545 664 aaKnown RBP17.23■□□□□ 0.35
SNCA-209ENST00000506244 FTLP02792 175 aaPredicted RBP17.23■□□□□ 0.35
SNCA-209ENST00000506244 HNRNPH3P31942 346 aaKnown RBP17.23■□□□□ 0.35
SNCA-209ENST00000506244 RFC1P35251 1148 aaPredicted RBP17.23■□□□□ 0.35
SNCA-209ENST00000506244 ZNF143P52747 638 aaPredicted RBP17.23■□□□□ 0.35
SNCA-209ENST00000506244 SLC12A1Q13621 1099 aa17.23■□□□□ 0.35
SNCA-209ENST00000506244 CCDC14Q49A88 953 aa17.23■□□□□ 0.35
SNCA-209ENST00000506244 FBXL22Q6P050 247 aa17.23■□□□□ 0.35
SNCA-209ENST00000506244 KIAA0907Q7Z7F0 614 aaPredicted RBP17.23■□□□□ 0.35
SNCA-209ENST00000506244 FAM131BQ86XD5 332 aa17.23■□□□□ 0.35
SNCA-209ENST00000506244 DRC7Q8IY82 874 aa17.23■□□□□ 0.35
SNCA-209ENST00000506244 CFAP52Q8N1V2 620 aa17.23■□□□□ 0.35
SNCA-209ENST00000506244 FAM172AQ8WUF8 416 aa17.23■□□□□ 0.35
SNCA-209ENST00000506244 ZNF653Q96CK0 615 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms