RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 POLGP54098 1239 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 GPX6P59796 221 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 FKBP1BP68106 108 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 HYAL2Q12891 473 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 FASTKD3Q14CZ7 662 aaKnown RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 CCDC14Q49A88 953 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 GDF6Q6KF10 455 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 OTUD6AQ7L8S5 288 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 C12orf40Q86WS4 652 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 TP53INP2Q8IXH6 220 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 KATNAL2Q8IYT4 538 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 DEPTORQ8TB45 409 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 ZNF564Q8TBZ8 553 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 FBXO25Q8TCJ0 367 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 RSPH1Q8WYR4 309 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 UBXN10Q96LJ8 280 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 FAM118BQ9BPY3 351 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 B3GNT5Q9BYG0 378 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 GOLGA2P5Q9HBQ8 144 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 EPB41L5Q9HCM4 733 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 C11orf16Q9NQ32 467 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 BSNQ9UPA5 3926 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 CLUHO75153 1309 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 SHROOM3Q8TF72 1996 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 HEXIM1O94992 359 aaKnown RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 SRGAP2CP0DJJ0 459 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 CAPN2P17655 700 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 TNFSF4P23510 183 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 CCT5P48643 541 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 HIBCHQ6NVY1 386 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 CTU1Q7Z7A3 348 aaKnown RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 RPAINQ86UA6 219 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 KCT2Q8NC54 265 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 SLC17A8Q8NDX2 589 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 CMASQ8NFW8 434 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 PBKQ96KB5 322 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 NSMCE3Q96MG7 304 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 PPM1MQ96MI6 270 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 ZNF317Q96PQ6 595 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 MAP7D2Q96T17 732 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 MSTO1Q9BUK6 570 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 DCLK3Q9C098 648 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 RNF38Q9H0F5 515 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 POLMQ9NP87 494 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 SAE1Q9UBE0 346 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 GRHPRQ9UBQ7 328 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 MAGED1Q9Y5V3 778 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 C2CD4BA6NLJ0 364 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 K7ERI5 159 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 ITGB1P05556 798 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 NUDT17P0C025 328 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 ZSCAN5DPP0CG00 497 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 ESRRAP11474 423 aaPredicted RBP6.16□□□□□ -1.42
SCLT1-207ENST00000506233 PECAM1P16284 738 aaPredicted RBP6.16□□□□□ -1.42
SCLT1-207ENST00000506233 SCP2P22307 547 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 PEX2P28328 305 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 NOP2P46087 812 aaKnown RBP6.16□□□□□ -1.42
SCLT1-207ENST00000506233 TUBP50607 506 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 WDR4P57081 412 aaKnown RBP6.16□□□□□ -1.42
SCLT1-207ENST00000506233 BEX3Q00994 111 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 SEMA3BQ13214 749 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 LRRC14Q15048 493 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 ACAP2Q15057 778 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 RAB41Q5JT25 222 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 TMEM201Q5SNT2 666 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 TCERG1LQ5VWI1 586 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 NAA35Q5VZE5 725 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 VSTM1Q6UX27 236 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 CACNA2D4Q7Z3S7 1137 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 KIAA1328Q86T90 577 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 ZNF598Q86UK7 904 aaKnown RBP6.16□□□□□ -1.42
SCLT1-207ENST00000506233 SESTD1Q86VW0 696 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 RPGRIP1Q96KN7 1286 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 TBATAQ96M53 351 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 HS3ST6Q96QI5 342 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 DDX23Q9BUQ8 820 aaKnown RBP6.16□□□□□ -1.42
SCLT1-207ENST00000506233 RETREG1Q9H6L5 497 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 DMRT3Q9NQL9 472 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 CCM2LQ9NUG4 571 aaPredicted RBP6.16□□□□□ -1.42
SCLT1-207ENST00000506233 SOX13Q9UN79 622 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 hCG_1818297A0A087WSY0 165 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 A0A087WV62 115 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 SLC15A5A6NIM6 579 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 CLDN3O15551 220 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 HBP1O60381 514 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 PAEPP09466 180 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 KCNE1P15382 129 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 GRK4P32298 578 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 ZNF484Q5JVG2 852 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 CYP4A22Q5TCH4 519 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 ANKRD22Q5VYY1 191 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 DRICH1Q6PGQ1 229 aaPredicted RBP6.16□□□□□ -1.42
SCLT1-207ENST00000506233 DAAM2Q86T65 1068 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 TMEM110Q86TL2 294 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 ZNF677Q86XU0 584 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 KRT222Q8N1A0 295 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 PLD5Q8N7P1 536 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 ATP2A3Q93084 1043 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 VCPIP1Q96JH7 1222 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 SEMA4AQ9H3S1 761 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms