RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SALL4Q9UJQ4 1053 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 GTF3C4Q9UKN8 822 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 DSEQ9UL01 958 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 BRPF3Q9ULD4 1205 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 FZD4Q9ULV1 537 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 PCDHA5Q9Y5H7 936 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 KLF2Q9Y5W3 355 aaPredicted RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 PIKFYVEQ9Y2I7 2098 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 INTS1Q8N201 2190 aaKnown RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 HIVEP2P31629 2446 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 LOC101059948A0A1B0GTJ6 334 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 TARSL2A2RTX5 802 aaKnown RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ANKUB1A6NFN9 424 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CCDC69A6NI79 296 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 LRRC72A6NJI9 287 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 MKRN2OSH3BPM6 223 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 AGRPO00253 132 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 GABRDO14764 452 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 MUSKO15146 869 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 MID1O15344 667 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ATP2C2O75185 946 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 DNAJB5O75953 348 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 KLKB1P03952 638 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 DNTTP04053 509 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ALPPL2P10696 532 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 XRCC6P12956 609 aaKnown RBP eCLIP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CCL4P13236 92 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 FOSL1P15407 271 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CYP11B2P19099 503 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 FECHP22830 423 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 F8A1P23610 371 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 PAX3P23760 479 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 GNA11P29992 359 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 SSTR2P30874 369 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 DRD3P35462 400 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 PPP3CCP48454 512 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 TRAPPC10P48553 1259 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 TUBP50607 506 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ATP1A2P50993 1020 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 METAP1P53582 386 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CCL7P80098 99 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 MYL7Q01449 175 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 MCL1Q07820 350 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 SEPT6Q14141 434 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 C16orf72Q14CZ0 275 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 NR0B2Q15466 257 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ECM1Q16610 540 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ARHGAP44Q17R89 818 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 BMT2Q1RMZ1 405 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 DEFB133Q30KQ1 61 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 TTC31Q49AM3 519 aaPredicted RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 C14orf28Q4W4Y0 310 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 SLC45A4Q5BKX6 768 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ZNF542PQ5EBM4 170 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CRB2Q5IJ48 1285 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ZNF776Q68DI1 518 aaPredicted RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 NCAPH2Q6IBW4 605 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 JADE1Q6IE81 842 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 JMJD6Q6NYC1 403 aaPredicted RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 SYNE3Q6ZMZ3 975 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 PARS2Q7L3T8 475 aaKnown RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ANKS1BQ7Z6G8 1248 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 KIAA0907Q7Z7F0 614 aaPredicted RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 TMEM135Q86UB9 458 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ADIPOR2Q86V24 386 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 SCN4BQ8IWT1 228 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 DAW1Q8N136 415 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 THEM5Q8N1Q8 247 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 TMTC2Q8N394 836 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ACBD4Q8NC06 268 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 OR13H1Q8NG92 308 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 OR6B3Q8NGW1 331 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CXorf38Q8TB03 319 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 DEPTORQ8TB45 409 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CYB5D2Q8WUJ1 264 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 UCMAQ8WVF2 138 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ITLN2Q8WWU7 325 aaPredicted RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 PTPRN2Q92932 1015 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 SNRNP40Q96DI7 357 aaKnown RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 C14orf79Q96F83 325 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 IFT43Q96FT9 208 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 KLHDC7BQ96G42 594 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 PPP1R13BQ96KQ4 1090 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CEP295NLQ96MC4 621 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ACBD6Q9BR61 282 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 MRPL4Q9BYD3 311 aaKnown RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 LRRC2Q9BYS8 371 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 TRIM55Q9BYV6 548 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 SLC29A3Q9BZD2 475 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 TMEM134Q9H6X4 195 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 FBRSQ9HAH7 460 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CRTAC1Q9NQ79 661 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 ASF1BQ9NVP2 202 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 RBM28Q9NW13 759 aaKnown RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 DDX25Q9UHL0 483 aaKnown RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CYTH4Q9UIA0 394 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 PILRAQ9UKJ1 303 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 PNMA8BQ9ULN7 279 aaPredicted RBP3.52□□□□□ -1.85
TCOF1-208ENST00000506063 L1RE1Q9UN81 338 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms