RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PPP2R5DQ14738 602 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 LRRC14Q15048 493 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 PDK4Q16654 411 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 KBTBD12Q3ZCT8 623 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 PAN2Q504Q3 1202 aaKnown RBP17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 ZNF534Q76KX8 674 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 TAC4Q86UU9 113 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 IGDCC3Q8IVU1 814 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 CCNYQ8ND76 341 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 TBC1D13Q9NVG8 400 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 COMMD8Q9NX08 183 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 DONSONQ9NYP3 566 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 OR12D3Q9UGF7 316 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 PTPRDP23468 1912 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 SDR42E2A6NKP2 422 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 TNFRSF10BO14763 440 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 FKTNO75072 461 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 TRPA1O75762 1119 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 KRT38O76015 456 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 MAP3K6O95382 1288 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 PARNO95453 639 aaKnown RBP17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 OAS1P00973 400 aaKnown RBP17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 KRT4P19013 534 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 YY1P25490 414 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 GRIK1P39086 918 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 SLC5A3P53794 718 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 ELAVL2Q12926 359 aaKnown RBP17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 DNAJC3Q13217 504 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 MTA1Q13330 715 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 MBTPS1Q14703 1052 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 LACTB2Q53H82 288 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 HHATQ5VTY9 493 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 LRRTM3Q86VH5 581 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 LRRC49Q8IUZ0 686 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 ABI1Q8IZP0 508 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 GBP7Q8N8V2 638 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 LINC01599Q8WXQ3 324 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 LGMNQ99538 433 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 MKS1Q9NXB0 559 aa17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 USP15Q9Y4E8 981 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-204ENST00000505676 PITPNM1O00562 1244 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 SNRPAP09012 282 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 SLC2A3P11169 496 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 HOXC13P31276 330 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 CCR1P32246 355 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 GRK4P32298 578 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 WASHC5Q12768 1159 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 FRG1Q14331 258 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 FAXCQ5TGI0 409 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 DENND5BQ6ZUT9 1274 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 CDKL2Q92772 493 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 RNF34Q969K3 372 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 TTC17Q96AE7 1141 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 STAMBPL1Q96FJ0 436 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 CFAP36Q96G28 342 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 SERPINB11Q96P15 392 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 MRPL9Q9BYD2 267 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 CATSPERBQ9H7T0 1116 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 SCML2Q9UQR0 700 aa17.77■□□□□ 0.44
TRAPPC11-204ENST00000505676 FAM159BA6NKW6 160 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 ALADP13716 330 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 CDK7P50613 346 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 SLC18A2Q05940 514 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 MTFR1Q15390 333 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 BANPQ8N9N5 519 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 HASPINQ8TF76 798 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 SEPT8Q92599 483 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 MAGEB5Q9BZ81 275 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 VPS11Q9H270 941 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 NLRC5Q86WI3 1866 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 DNM1LO00429 736 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 TADA2AO75478 443 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 ALDH1A2O94788 518 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 DDHD2O94830 711 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 FSBPO95073 299 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 GSTA1P08263 222 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 PGAM1P18669 254 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 OR1G1P47890 313 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 WDR4P57081 412 aaKnown RBP17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 EFTUD2Q15029 972 aaKnown RBP eCLIP17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 MSANTD2Q6P1R3 559 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 UNC5AQ6ZN44 842 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 MON1AQ86VX9 555 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 EDEM1Q92611 657 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 APOPT1Q96IL0 206 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 ELAC2Q9BQ52 826 aaKnown RBP17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 SAGE1Q9NXZ1 904 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 KLHL8Q9P2G9 620 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 STARD13Q9Y3M8 1113 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 PCDHB7Q9Y5E2 793 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 PCDHB5Q9Y5E4 795 aa17.76■□□□□ 0.43
TRAPPC11-204ENST00000505676 CCT8L1PA6NM43 557 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 AVILO75366 819 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 C1QAP02745 245 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 ITGB1P05556 798 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 TAC1P20366 129 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 EPHB2P29323 1055 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 GARSP41250 739 aaKnown RBP17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 RNF187Q5TA31 235 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 ARMC3Q5W041 872 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms