RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ARRDC3Q96B67 414 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 RSPRY1Q96DX4 576 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 SAAL1Q96ER3 474 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 MASTLQ96GX5 879 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 NEU1Q99519 415 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 MPHOSPH8Q99549 860 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 BAG1Q99933 345 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 DPCDQ9BVM2 203 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 PHF7Q9BWX1 381 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 ITPAQ9BY32 194 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 ARHGAP39Q9C0H5 1083 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 SEPT11Q9NVA2 429 aaKnown RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 HCN3Q9P1Z3 774 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 SLC25A10Q9UBX3 287 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 RAB21Q9UL25 225 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 TRPC5Q9UL62 973 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 SLC30A1Q9Y6M5 507 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 PASKQ96RG2 1323 aa4.24□□□□□ -1.73
TRAPPC13-208ENST00000505553 KAT6BQ8WYB5 2073 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 AGAP5A6NIR3 686 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZAR1LA6NP61 321 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 LEFTY2O00292 366 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 DHX16O60231 1041 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 MLYCDO95822 493 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 DNTTP04053 509 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 CYP3A4P08684 503 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 MAPK4P31152 587 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 RCAN1P53805 252 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 KRTAP10-9P60411 292 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 RPS3AP61247 264 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 RPL15P61313 204 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 MC1RQ01726 317 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 OCA2Q04671 838 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 TLE3Q04726 772 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 DCTN2Q13561 401 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 CCDC142Q17RM4 750 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 SPDYE7PQ495Y7 208 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 AASDHQ4L235 1098 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 LRRC24Q50LG9 513 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 CCDC184Q52MB2 194 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 SLC30A6Q6NXT4 461 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 Q6ZSN1 163 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 ADGRG6Q86SQ4 1221 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 P3H2Q8IVL5 708 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 C1orf210Q8IVY1 113 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 METTL25Q8N6Q8 603 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 SUPT20HQ8NEM7 779 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 RFWD2Q8NHY2 731 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 TMEM125Q96AQ2 219 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 CALML4Q96GE6 196 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZMAT2Q96NC0 199 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 LENG8Q96PV6 779 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 NPAS1Q99742 590 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZSWIM1Q9BR11 485 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 TPSD1Q9BZJ3 242 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 AMBRA1Q9C0C7 1298 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 SLC25A18Q9H1K4 315 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 RANBP17Q9H2T7 1088 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 MUC13Q9H3R2 512 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 GLOD4Q9HC38 313 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 PDE11AQ9HCR9 933 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 HCFC1R1Q9NWW0 138 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 KCND2Q9NZV8 630 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 EIF2B4Q9UI10 523 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 SLC12A4Q9UP95 1085 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 PIAS3Q9Y6X2 628 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 KDM3AQ9Y4C1 1321 aa4.23□□□□□ -1.73
TRAPPC13-208ENST00000505553 C3orf70A6NLC5 250 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 PTGES3LE9PB15 166 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 M0QYT0 321 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 CYP27B1O15528 508 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 CSH1P0DML2 217 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 CSH2P0DML3 217 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 ACP5P13686 325 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZNF37AP17032 561 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 MAKP20794 623 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 FBLP22087 321 aaKnown RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 APOBEC3AP31941 199 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 MSX2P35548 267 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 BSGP35613 385 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 HARS2P49590 506 aaKnown RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 FAM3BP58499 235 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 EPS8Q12929 822 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 FOXL1Q12952 345 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 LY6KQ17RY6 165 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 RUNDC3AQ59EK9 446 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 C1QTNF12Q5T7M4 302 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 SP5Q6BEB4 398 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 MAMDC4Q6UXC1 1216 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 DTX2Q86UW9 622 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 TAGAPQ8N103 731 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 TTC39CQ8N584 583 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 CCDC191Q8NCU4 936 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 NPIPB3Q92617 1050 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 KIF1BPQ96EK5 621 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 FAM120BQ96EK7 910 aaKnown RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 BOD1Q96IK1 185 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 C5orf34Q96MH7 638 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 AGAP2Q99490 1192 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms