RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 CRY1Q16526 586 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 ARL13BQ3SXY8 428 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 NBPF12Q5TAG4 269 aaPredicted RBP13.63□□□□□ -0.23
LETM1-203ENST00000505551 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
LETM1-203ENST00000505551 XKR5Q6UX68 686 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 EEPD1Q7L9B9 569 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 LYSMD3Q7Z3D4 306 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 MIER3Q7Z3K6 550 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 RCOR2Q8IZ40 523 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 ESX1Q8N693 406 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 CHURC1Q8WUH1 139 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 CRYGNQ8WXF5 182 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 ASIC4Q96FT7 647 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 WRNIP1Q96S55 665 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 RTKNQ9BST9 563 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 TMEM121Q9BTD3 319 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 RPF2Q9H7B2 306 aaKnown RBP13.63□□□□□ -0.23
LETM1-203ENST00000505551 RAVER2Q9HCJ3 691 aaKnown RBP13.63□□□□□ -0.23
LETM1-203ENST00000505551 ARHGEF37A1IGU5 675 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 PI4K2BG5E9Z4 385 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 SGK1O00141 431 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 TMEM63AO94886 807 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 IFNB1P01574 187 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 EPHA3P29320 983 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 PRELPP51888 382 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 ESRRGP62508 458 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 KCNJ8Q15842 424 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 PDPK2PQ6A1A2 396 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 MAVSQ7Z434 540 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 RAVER1Q8IY67 606 aaKnown RBP13.63□□□□□ -0.23
LETM1-203ENST00000505551 FIBCD1Q8N539 461 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 ZNF420Q8TAQ5 688 aaPredicted RBP13.63□□□□□ -0.23
LETM1-203ENST00000505551 ADAMTS16Q8TE57 1224 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 STRA6Q9BX79 667 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 OSBPL11Q9BXB4 747 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
LETM1-203ENST00000505551 VTA1Q9NP79 307 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 CDC14AQ9UNH5 594 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 TTLL3Q9Y4R7 772 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 GREB1LQ9C091 1923 aaPredicted RBP13.63□□□□□ -0.23
LETM1-203ENST00000505551 A0A1W2PQ67 120 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 KRBA1A5PL33 1030 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 COX4I1P13073 169 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 BMXP51813 675 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 PEX3P56589 373 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 PLA2G4FQ68DD2 849 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 MFSD7Q6UXD7 560 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 SLC26A11Q86WA9 606 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 IGDCC3Q8IVU1 814 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 PDIK1LQ8N165 341 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 HELQQ8TDG4 1101 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 TRUB1Q8WWH5 349 aaKnown RBP13.63□□□□□ -0.23
LETM1-203ENST00000505551 EIF2AK1Q9BQI3 630 aaKnown RBP13.63□□□□□ -0.23
LETM1-203ENST00000505551 KLHL11Q9NVR0 708 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 DNAJC28Q9NX36 388 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 DCAF16Q9NXF7 216 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 SLC8A2Q9UPR5 921 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 DNAJC16Q9Y2G8 782 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 SLC30A1Q9Y6M5 507 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 SCINQ9Y6U3 715 aa13.63□□□□□ -0.23
LETM1-203ENST00000505551 PSME4Q14997 1843 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 TMEM114B3SHH9 223 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 H3BMQ9 156 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 RFPL1O75677 317 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 FOSP01100 380 aaPredicted RBP13.62□□□□□ -0.23
LETM1-203ENST00000505551 C1QAP02745 245 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 SNRPAP09012 282 aaKnown RBP13.62□□□□□ -0.23
LETM1-203ENST00000505551 FLOT2Q14254 428 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 ZCCHC23Q6ZST2 131 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 NDUFAF2Q8N183 169 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 SLC35B2Q8TB61 432 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 DLG3Q92796 817 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 TANKQ92844 425 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 APBB2Q92870 758 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 ATP2A3Q93084 1043 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 COG8Q96MW5 612 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 PSD2Q9BQI7 771 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 MRPL46Q9H2W6 279 aaKnown RBP13.62□□□□□ -0.23
LETM1-203ENST00000505551 CLK4Q9HAZ1 481 aaKnown RBP13.62□□□□□ -0.23
LETM1-203ENST00000505551 PARVBQ9HBI1 364 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 HACL1Q9UJ83 578 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 VAV3Q9UKW4 847 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 TCRBV7S3A2A0A539 114 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 ASNSP08243 561 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 WEE2P0C1S8 567 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
LETM1-203ENST00000505551 PTPN7P35236 360 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 IDH3AP50213 366 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 DPYSQ14117 519 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 NR1D2Q14995 579 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 MGAT5BQ3V5L5 792 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 TEDDM1Q5T9Z0 273 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 TMEM174Q8WUU8 243 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 SEMA4DQ92854 862 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 CCDC138Q96M89 665 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 SERPINI1Q99574 410 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 DEFB129Q9H1M3 183 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 RAB20Q9NX57 234 aa13.62□□□□□ -0.23
LETM1-203ENST00000505551 KLHL3Q9UH77 587 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms