RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 ADAM33Q9BZ11 813 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 OLA1Q9NTK5 396 aaKnown RBP11.66□□□□□ -0.54
NFKB1-205ENST00000505458 CARNS1A5YM72 827 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 IRAK2O43187 625 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 IL1BP01584 269 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 SRGAP2BP0DMP2 458 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 BDNFP23560 247 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 ALDH3A1P30838 453 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 HOXC13P31276 330 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 CCDC15Q0P6D6 951 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 QPCTQ16769 361 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 FYB2Q5VWT5 728 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 BHLHA9Q7RTU4 235 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 ABI1Q8IZP0 508 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 CCNYQ8ND76 341 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 RAB3IL1Q8TBN0 382 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 RNF34Q969K3 372 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 ZIC5Q96T25 663 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 WDR83Q9BRX9 315 aaKnown RBP11.66□□□□□ -0.54
NFKB1-205ENST00000505458 PRDM12Q9H4Q4 367 aa11.66□□□□□ -0.54
NFKB1-205ENST00000505458 TIMM13Q9Y5L4 95 aaPredicted RBP11.66□□□□□ -0.54
NFKB1-205ENST00000505458 A0A1W2PQ45 241 aaPredicted RBP11.65□□□□□ -0.54
NFKB1-205ENST00000505458 A0A1W2PQY0 241 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 FAM159BA6NKW6 160 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 KRT4P19013 534 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 CCR1P32246 355 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 BRCC3P46736 316 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 SPANXN3Q5MJ09 141 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 SPDYAQ5MJ70 313 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 RNF43Q68DV7 783 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 MSANTD2Q6P1R3 559 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 LRRC8DQ7L1W4 858 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 LINC00523Q86TU6 105 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 BANPQ8N9N5 519 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 DQX1Q8TE96 717 aaKnown RBP11.65□□□□□ -0.54
NFKB1-205ENST00000505458 MZB1Q8WU39 189 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 CFAP36Q96G28 342 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 SIGLEC10Q96LC7 697 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 TSGA13Q96PP4 275 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 TMEM175Q9BSA9 504 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 KLHL8Q9P2G9 620 aaPredicted RBP11.65□□□□□ -0.54
NFKB1-205ENST00000505458 PLXNA3P51805 1871 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 H7C4K7 107 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 ALDH1A2O94788 518 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 RTN3O95197 1032 aaPredicted RBP11.65□□□□□ -0.54
NFKB1-205ENST00000505458 ILF2Q12905 390 aaKnown RBP11.65□□□□□ -0.54
NFKB1-205ENST00000505458 KBTBD12Q3ZCT8 623 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 ZNF280DQ6N043 979 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 TIGD7Q6NT04 549 aaPredicted RBP11.65□□□□□ -0.54
NFKB1-205ENST00000505458 CAPN12Q6ZSI9 719 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 HFE2Q6ZVN8 426 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 MARK2Q7KZI7 788 aaKnown RBP11.65□□□□□ -0.54
NFKB1-205ENST00000505458 COLGALT2Q8IYK4 626 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 SEPT8Q92599 483 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 ELAC2Q9BQ52 826 aaKnown RBP11.65□□□□□ -0.54
NFKB1-205ENST00000505458 PITPNM3Q9BZ71 974 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 PCDHB5Q9Y5E4 795 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 KIF3CO14782 793 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 METTL18O95568 372 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 VAV1P15498 845 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 STXBP5Q5T5C0 1151 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 TIFABQ6ZNK6 161 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 TAC4Q86UU9 113 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 MON1AQ86VX9 555 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 PYROXD2Q8N2H3 581 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 FATE1Q969F0 183 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 TBC1D31Q96DN5 1066 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 KCNK16Q96T55 309 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 TKTL2Q9H0I9 626 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 RETREG1Q9H6L5 497 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 NSMCE4AQ9NXX6 385 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 OR12D3Q9UGF7 316 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 SCML2Q9UQR0 700 aa11.65□□□□□ -0.54
NFKB1-205ENST00000505458 TAC1P20366 129 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 CCNFP41002 786 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 GARSP41250 739 aaKnown RBP11.64□□□□□ -0.55
NFKB1-205ENST00000505458 NPY2RP49146 381 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 ACTN3Q08043 901 aaPredicted RBP11.64□□□□□ -0.55
NFKB1-205ENST00000505458 LRRC14Q15048 493 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 HP1BP3Q5SSJ5 553 aaPredicted RBP11.64□□□□□ -0.55
NFKB1-205ENST00000505458 TRAF7Q6Q0C0 670 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 GPRIN1Q7Z2K8 1008 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 CD99L2Q8TCZ2 262 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 GBA3Q9H227 469 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 FGFR1OP2Q9NVK5 253 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 BFARQ9NZS9 450 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 MAD1L1Q9Y6D9 718 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 SYNJ2BP-COX16A0A087WUM0 186 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 H0YHG0 523 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 LPXNO60711 386 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 AP2A1O95782 977 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 INHAP05111 366 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 TROVE2P10155 538 aaKnown RBP eCLIP11.64□□□□□ -0.55
NFKB1-205ENST00000505458 GRIK1P39086 918 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 GAD2Q05329 585 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 UNC5AQ6ZN44 842 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 DENND5BQ6ZUT9 1274 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 TRPM8Q7Z2W7 1104 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 CCDC117Q8IWD4 279 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms