RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 DUSP8Q13202 625 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ACAP1Q15027 740 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 PPP2R5BQ15173 497 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZNF628Q5EBL2 1059 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 RNF43Q68DV7 783 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 TMEM200BQ69YZ2 307 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 MSANTD2Q6P1R3 559 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 TRAT1Q6PIZ9 186 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZC3H14Q6PJT7 736 aaKnown RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 SARM1Q6SZW1 724 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 MTHFD1LQ6UB35 978 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ABRAXAS1Q6UWZ7 409 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 MAMDC4Q6UXC1 1216 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 GSTA5Q7RTV2 222 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 TXNRD3Q86VQ6 643 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ARHGEF25Q86VW2 580 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 TICAM1Q8IUC6 712 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 P3H2Q8IVL5 708 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 PEX5LQ8IYB4 626 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 BCL6BQ8N143 479 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 PTGR2Q8N8N7 351 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 TMEM116Q8NCL8 245 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 NSUN7Q8NE18 718 aaKnown RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 MCUQ8NE86 351 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 CADM4Q8NFZ8 388 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 MBD3L2Q8NHZ7 208 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 PTP4A1Q93096 173 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZNF622Q969S3 477 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 FAM162AQ96A26 154 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 RNFT2Q96EX2 444 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 MASTLQ96GX5 879 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 PPP1R13BQ96KQ4 1090 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 RPL10LQ96L21 214 aaKnown RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 FER1L6-AS2Q96M78 137 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 KLHL32Q96NJ5 620 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 GAD1Q99259 594 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 FERMT1Q9BQL6 677 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 NAA11Q9BSU3 229 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 FAM129AQ9BZQ8 928 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 KRT23Q9C075 422 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 CTDSP1Q9GZU7 261 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 PDE11AQ9HCR9 933 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 SNX15Q9NRS6 342 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 INTS10Q9NVR2 710 aaKnown RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 DCAF16Q9NXF7 216 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 HSPBP1Q9NZL4 362 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 HCN3Q9P1Z3 774 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 MARCH4Q9P2E8 410 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 UBA2Q9UBT2 640 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 RGS17Q9UGC6 210 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 MKLN1Q9UL63 735 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC12A4Q9UP95 1085 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 MTMR6Q9Y217 621 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 OSGIN2Q9Y236 505 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 RCE1Q9Y256 329 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZBTB1Q9Y2K1 713 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ADGRF5Q8IZF2 1346 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 CLSPNQ9HAW4 1339 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 ATRNL1Q5VV63 1379 aa3.85□□□□□ -1.79
HMGB1P22-201ENST00000505315 CCDC187A0A096LP49 1063 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 A0A1W2PRV1 198 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 TRBC2A0A5B9 178 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 C2orf78A6NCI8 922 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 A6NL46 340 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZNF213O14771 459 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 CD3EAPO15446 510 aaKnown RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 STX6O43752 255 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 KINO60870 393 aaKnown RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 CSPG5O95196 566 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ITGB1P05556 798 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 KRT13P13646 458 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 SELLP14151 372 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 LAG3P18627 525 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 FDXRP22570 491 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 RFC1P35251 1148 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 KRT2P35908 639 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 PEX19P40855 299 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 MTHFRP42898 656 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 GCLCP48506 637 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 NT5C2P49902 561 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 CDK7P50613 346 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 DGKEP52429 567 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZNF132P52740 706 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 CAPZA1P52907 286 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 RRADP55042 308 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 NPEPPSP55786 919 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 CLRN1P58418 232 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 RBM6P78332 1123 aaKnown RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 ATP2C1P98194 919 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 PRKCQQ04759 706 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 PIGFQ07326 219 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 KLHL30Q0D2K2 578 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 RPA4Q13156 261 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 SEMA3BQ13214 749 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 THOC5Q13769 683 aaKnown RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 CBFBQ13951 182 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 UBXN2BQ14CS0 331 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 LAPTM4AQ15012 233 aa3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 TAF7Q15545 349 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P22-201ENST00000505315 DPCR1Q3MIW9 517 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms