RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 COG4Q9H9E3 785 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 EVPLQ92817 2033 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 CASQ2O14958 399 aaPredicted RBP12.22□□□□□ -0.45
UBE3D-206ENST00000505226 MSX2P35548 267 aaPredicted RBP12.22□□□□□ -0.45
UBE3D-206ENST00000505226 MTTPP55157 894 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 TTLL12Q14166 644 aaPredicted RBP12.22□□□□□ -0.45
UBE3D-206ENST00000505226 PKDCCQ504Y2 493 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 BSPRYQ5W0U4 402 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 FAM160B1Q5W0V3 765 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 CDKL3Q8IVW4 592 aaPredicted RBP12.22□□□□□ -0.45
UBE3D-206ENST00000505226 CCDC185Q8N715 623 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 AGR3Q8TD06 166 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 CPB2Q96IY4 423 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 KCTD15Q96SI1 283 aaPredicted RBP12.22□□□□□ -0.45
UBE3D-206ENST00000505226 STN1Q9H668 368 aaKnown RBP12.22□□□□□ -0.45
UBE3D-206ENST00000505226 FAM49BQ9NUQ9 324 aa12.22□□□□□ -0.45
UBE3D-206ENST00000505226 TXNDC9O14530 226 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 MDM4O15151 490 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 HCRTO43612 131 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 RALBP11234 206 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 COX4I1P13073 169 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 SDC4P31431 198 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 MLH1P40692 756 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 INCA1Q0VD86 236 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 SNAPC2Q13487 334 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 NCBP2-AS2Q69YL0 99 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 ARHGAP22Q7Z5H3 698 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 B4GALNT2Q8NHY0 566 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 ACMSDQ8TDX5 336 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 NMD3Q96D46 503 aaKnown RBP12.21□□□□□ -0.45
UBE3D-206ENST00000505226 QKIQ96PU8 341 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBE3D-206ENST00000505226 CSPG4P5Q96PW8 444 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 OR52B2Q96RD2 323 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 IFT122Q9HBG6 1241 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 TNFSF13BQ9Y275 285 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 SLC4A7Q9Y6M7 1214 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 FBXO21O94952 628 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 IL18RAPO95256 599 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 DPEP1P16444 411 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 CNTFP26441 200 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 SLC6A3Q01959 620 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 DYNC1I2Q13409 638 aaKnown RBP12.21□□□□□ -0.45
UBE3D-206ENST00000505226 TNFAIP1Q13829 316 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 ANKRD20A4Q4UJ75 823 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 PABPC1LQ4VXU2 614 aaKnown RBP12.21□□□□□ -0.45
UBE3D-206ENST00000505226 PPM1LQ5SGD2 360 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 METTL7BQ6UX53 244 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 ATXN7L3BQ96GX2 97 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 FCRL3Q96P31 734 aaPredicted RBP12.21□□□□□ -0.45
UBE3D-206ENST00000505226 LENG8Q96PV6 779 aaPredicted RBP12.21□□□□□ -0.45
UBE3D-206ENST00000505226 GPR20Q99678 358 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 VRTNQ9H8Y1 702 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 CYP3A43Q9HB55 503 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 TMPRSS4Q9NRS4 437 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 SYBUQ9NX95 663 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 DCDC2Q9UHG0 476 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 ZNF112Q9UJU3 913 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 COMMD3-BMI1R4GMX3 469 aa12.21□□□□□ -0.45
UBE3D-206ENST00000505226 MYOCOSA0A1B0GUC4 107 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 EDNRBP24530 442 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 ABCG1P45844 678 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 CHN2P52757 468 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 INHBCP55103 352 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 KLF10Q13118 480 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 DPYSL2Q16555 572 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 DBN1Q16643 649 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 GRAMD1BQ3KR37 738 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 OGFRL1Q5TC84 451 aaPredicted RBP12.21□□□□□ -0.46
UBE3D-206ENST00000505226 ARMC3Q5W041 872 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 EPGNQ6UW88 154 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 ACOT1Q86TX2 421 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 TP53INP2Q8IXH6 220 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 CMTM5Q96DZ9 223 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 C11orf84Q9BUA3 381 aaPredicted RBP12.21□□□□□ -0.46
UBE3D-206ENST00000505226 PICK1Q9NRD5 415 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 HES2Q9Y543 173 aa12.21□□□□□ -0.46
UBE3D-206ENST00000505226 ZNF638Q14966 1978 aaKnown RBP12.2□□□□□ -0.46
UBE3D-206ENST00000505226 C15orf38-AP3S2A0A0A6YYH1 394 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.2□□□□□ -0.46
UBE3D-206ENST00000505226 VILLO15195 856 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 TFAP2AP05549 437 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 GOT1P17174 413 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 CCR10P46092 362 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 PGGT1BP53609 377 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 ZNF280AP59817 542 aaPredicted RBP12.2□□□□□ -0.46
UBE3D-206ENST00000505226 DLG2Q15700 870 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 TBC1D25Q3MII6 688 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 EFCAB12Q6NXP0 572 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 PAOXQ6QHF9 649 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 ARPINQ7Z6K5 226 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 SPATA24Q86W54 205 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 METTL25Q8N6Q8 603 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 DRAXINQ8NBI3 349 aaPredicted RBP12.2□□□□□ -0.46
UBE3D-206ENST00000505226 COLGALT1Q8NBJ5 622 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 ACVR1CQ8NER5 493 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 SLC35F5Q8WV83 523 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 JADE3Q92613 823 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 TBCBQ99426 244 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 MRPL45Q9BRJ2 306 aaKnown RBP12.2□□□□□ -0.46
UBE3D-206ENST00000505226 SLC4A5Q9BY07 1137 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms