RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 MICU3Q86XE3 530 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 PPP1R3BQ86XI6 285 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 FAM90A1Q86YD7 464 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 GPR135Q8IZ08 494 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 TTC30BQ8N4P2 665 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 CNNM3Q8NE01 707 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 ANKRD20A12PQ8NF67 263 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 CCDC12Q8WUD4 166 aaPredicted RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 IP6K1Q92551 441 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 MAML1Q92585 1016 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 RRP36Q96EU6 259 aaKnown RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 SNX27Q96L92 541 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 PANX2Q96RD6 677 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 CTAGE1Q96RT6 745 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 DDX23Q9BUQ8 820 aaKnown RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 PARD6BQ9BYG5 372 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 KRTAP4-4Q9BYR3 166 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 OR10A5Q9H207 317 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 BCO1Q9HAY6 547 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 SEPSECSQ9HD40 501 aaKnown RBP4.46□□□□□ -1.7
RFC1-208ENST00000504849 GPR108Q9NPR9 543 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 PAG1Q9NWQ8 432 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 TMEM160Q9NX00 188 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 RGL1Q9NZL6 768 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 RAI14Q9P0K7 980 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 VPS18Q9P253 973 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 IGSF9Q9P2J2 1179 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 NR2E1Q9Y466 385 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 PHLPP1O60346 1717 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 UTRNP46939 3433 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 ZNF609O15014 1411 aa4.46□□□□□ -1.7
RFC1-208ENST00000504849 CHD4Q14839 1912 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 KLF18A0A0U1RQI7 1052 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 A0A1W2PPH5 198 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 A0A1W2PR48 441 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 CTAGE15A4D2H0 777 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 BTN3A1O00481 513 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 TOR1BO14657 336 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 MAP2K7O14733 419 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 RNF113AO15541 343 aaKnown RBP4.45□□□□□ -1.7
RFC1-208ENST00000504849 KCNQ3O43525 872 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 SEC31AO94979 1220 aaKnown RBP4.45□□□□□ -1.7
RFC1-208ENST00000504849 TNFRSF6BO95407 300 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 CTDNEP1O95476 244 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 GLP2RO95838 553 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 ENO2P09104 434 aaPredicted RBP4.45□□□□□ -1.7
RFC1-208ENST00000504849 CTAGE8P0CG41 777 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 ALOX12P18054 663 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 CHMP24386 653 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 GABRB3P28472 473 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 STAT1P42224 750 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 COPAP53621 1224 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 RRADP55042 308 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 GUCY1B3Q02153 619 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 CHRNDQ07001 517 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 GCKRQ14397 625 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 PSMD6Q15008 389 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 DGKDQ16760 1214 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 TRIM71Q2Q1W2 868 aaKnown RBP4.45□□□□□ -1.7
RFC1-208ENST00000504849 TTC39AQ5SRH9 613 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 MAP3K21Q5TCX8 1036 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 UNC13DQ70J99 1090 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 RHOUQ7L0Q8 258 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 CTAGE6Q86UF2 777 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 ARHGEF25Q86VW2 580 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 SGMS1Q86VZ5 419 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 CNGA4Q8IV77 575 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 CTAGE4Q8IX94 777 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 EFCAB13Q8IY85 973 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 C10orf67Q8IYJ2 551 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 ANKRD52Q8NB46 1076 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 GLIS1Q8NBF1 620 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 MSANTD4Q8NCY6 345 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 CCDC148Q8NFR7 591 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 OR5AN1Q8NGI8 311 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 NCOA7Q8NI08 942 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 WDR48Q8TAF3 677 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 SNX33Q8WV41 574 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 RSC1A1Q92681 617 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 NELL1Q92832 810 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 RPGRIP1Q96KN7 1286 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 P2RX7Q99572 595 aaKnown RBP4.45□□□□□ -1.7
RFC1-208ENST00000504849 NAPGQ99747 312 aaPredicted RBP4.45□□□□□ -1.7
RFC1-208ENST00000504849 CENPOQ9BU64 300 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 FUT8Q9BYC5 575 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 FTOQ9C0B1 505 aaKnown RBP eCLIP4.45□□□□□ -1.7
RFC1-208ENST00000504849 C12orf65Q9H3J6 166 aaKnown RBP4.45□□□□□ -1.7
RFC1-208ENST00000504849 R3HDMLQ9H3Y0 253 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 RETREG1Q9H6L5 497 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 NRDE2Q9H7Z3 1164 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 VIPAS39Q9H9C1 493 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 A1CFQ9NQ94 594 aaKnown RBP4.45□□□□□ -1.7
RFC1-208ENST00000504849 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.45□□□□□ -1.7
RFC1-208ENST00000504849 ZNF212Q9UDV6 495 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 DBNLQ9UJU6 430 aaKnown RBP4.45□□□□□ -1.7
RFC1-208ENST00000504849 ADAM21Q9UKJ8 722 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 RAB21Q9UL25 225 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 CA14Q9ULX7 337 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 HPSEQ9Y251 543 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 CLIC4Q9Y696 253 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms