RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 RBM5P52756 815 aaKnown RBP eCLIP6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 SLC37A1P57057 533 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 DMWDQ09019 674 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 KPNB1Q14974 876 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 SEC23BQ15437 767 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 TAF12Q16514 161 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 LRRC24Q50LG9 513 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 ZNF484Q5JVG2 852 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 PRAMEF17Q5VTA0 474 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 SLC39A5Q6ZMH5 540 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 ADGRF3Q8IZF5 1079 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 USP13Q92995 863 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 ZNF845Q96IR2 970 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 COG8Q96MW5 612 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 TWNKQ96RR1 684 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 PIGSQ96S52 555 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 TMPRSS5Q9H3S3 457 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 PLEKHA2Q9HB19 425 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 RIC8AQ9NPQ8 531 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 BAG5Q9UL15 447 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 DERAQ9Y315 318 aa6.2□□□□□ -1.42
TRAPPC13-206ENST00000504751 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 STX16-NPEPL1H3BU86 382 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 STX16O14662 325 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 HNRNPRO43390 633 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 PAX3P23760 479 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 IDUAP35475 653 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 VPS41P49754 854 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 ALFQ53S48 1182 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 CC2D1BQ5T0F9 858 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 FBXO42Q6P3S6 717 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 LVRNQ6Q4G3 990 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 RANBP10Q6VN20 620 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 SYNE3Q6ZMZ3 975 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 TFAP2DQ7Z6R9 452 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 RFX6Q8HWS3 928 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 PNLDC1Q8NA58 520 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 ZNF398Q8TD17 642 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 P2RY11Q96G91 374 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 GPR78Q96P69 363 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 ASB2Q96Q27 587 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 HTATIP2Q9BUP3 242 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 HERC2P3Q9BVR0 1158 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 MRIQ9BWK5 157 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 RIOX1Q9H6W3 641 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 PDP2Q9P2J9 529 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 PI4KBQ9UBF8 816 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 DNAJC16Q9Y2G8 782 aa6.19□□□□□ -1.42
TRAPPC13-206ENST00000504751 LINC01548A6NM66 108 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 TMEM232C9JQI7 657 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 GRM8O00222 908 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 RRHO14718 337 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 CNPP09543 421 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 CSF1P09603 554 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 RFPL3SP0C7P2 107 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 CYP2A6P11509 494 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 ACP5P13686 325 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 BMP5P22003 454 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 CCR5P51681 352 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 ELLP55199 621 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 CERKLQ49MI3 558 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 STRIP1Q5VSL9 837 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 TMEM88Q6PEY1 159 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 PTGR2Q8N8N7 351 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 EXD3Q8N9H8 876 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 FSIP1Q8NA03 581 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 SRFBP1Q8NEF9 429 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 SENP7Q9BQF6 1050 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 NUAK2Q9H093 628 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 RMI1Q9H9A7 625 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 GGA3Q9NZ52 723 aa6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 C9orf78Q9NZ63 289 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 RRP7AQ9Y3A4 280 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-206ENST00000504751 PRRT4C9JH25 899 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 CNTN5O94779 1100 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 NUDT3O95989 172 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 CHN1P15882 459 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 SHC2P98077 582 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 B4GALNT1Q00973 533 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 NHLH1Q02575 133 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 POU5F1BQ06416 359 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 CTXN3Q4LDR2 81 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 TMEM119Q4V9L6 283 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 MAP3K21Q5TCX8 1036 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 ZNF788Q6ZQV5 615 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 PRIMA1Q86XR5 153 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 ADPRHL1Q8NDY3 354 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 LINS1Q8NG48 757 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 ARRDC3Q96B67 414 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 TBATAQ96M53 351 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 PRDM16Q9HAZ2 1276 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 PDE11AQ9HCR9 933 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 HEMK1Q9Y5R4 338 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 SPATA31A5Q5VU36 1347 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 SPATA31A6Q5VVP1 1343 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 SPATA31A7Q8IWB4 1347 aa6.17□□□□□ -1.42
TRAPPC13-206ENST00000504751 SEPT4O43236 478 aa6.16□□□□□ -1.42
TRAPPC13-206ENST00000504751 PYGLP06737 847 aa6.16□□□□□ -1.42
TRAPPC13-206ENST00000504751 POLBP06746 335 aa6.16□□□□□ -1.42
TRAPPC13-206ENST00000504751 CNTFP26441 200 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms