RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CEP83Q9Y592 693 aa22.88■■□□□ 1.25
LSM6-203ENST00000503982 ASCC3Q8N3C0 2202 aaKnown RBP22.88■■□□□ 1.25
LSM6-203ENST00000503982 OPHN1O60890 802 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 FYNP06241 537 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 TPMTP51580 245 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 PTK2Q05397 1052 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 MEA1Q16626 185 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 MAN2A1Q16706 1144 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 MPP7Q5T2T1 576 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 SYPL2Q5VXT5 272 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 NADSYN1Q6IA69 706 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 METTL3Q86U44 580 aaKnown RBP22.87■■□□□ 1.25
LSM6-203ENST00000503982 CHSY1Q86X52 802 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 WFDC5Q8TCV5 224 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 SNX19Q92543 992 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 AZIN2Q96A70 460 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 SLC4A5Q9BY07 1137 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 IRX2Q9BZI1 471 aaPredicted RBP22.87■■□□□ 1.25
LSM6-203ENST00000503982 NUCKS1Q9H1E3 243 aaKnown RBP22.87■■□□□ 1.25
LSM6-203ENST00000503982 LHX5Q9H2C1 402 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 PDCL3Q9H2J4 239 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 THAP9Q9H5L6 903 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 SYNCQ9H7C4 482 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 FAM204AQ9H8W3 233 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 SLC12A6Q9UHW9 1150 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 CYTH4Q9UIA0 394 aa22.87■■□□□ 1.25
LSM6-203ENST00000503982 BECN2A8MW95 431 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 KCNJ18B7U540 433 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 H0Y626 953 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 PAPSS1O43252 624 aaPredicted RBP22.86■■□□□ 1.25
LSM6-203ENST00000503982 DLDP09622 509 aaKnown RBP22.86■■□□□ 1.25
LSM6-203ENST00000503982 PON1P27169 355 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 KRT9P35527 623 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 COPAP53621 1224 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 RPS24P62847 133 aaKnown RBP22.86■■□□□ 1.25
LSM6-203ENST00000503982 YWHAZP63104 245 aaKnown RBP22.86■■□□□ 1.25
LSM6-203ENST00000503982 FOXC1Q12948 553 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 PDCLQ13371 301 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 NNTQ13423 1086 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 DCAF12L1Q5VU92 463 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 RAP1GAP2Q684P5 730 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 OR6B2Q6IFH4 312 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 ADIPOR2Q86V24 386 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 LGI2Q8N0V4 545 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 CFAP52Q8N1V2 620 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 MINDY1Q8N5J2 469 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.86■■□□□ 1.25
LSM6-203ENST00000503982 ATP6V0D2Q8N8Y2 350 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 PRICKLE1Q96MT3 831 aaPredicted RBP22.86■■□□□ 1.25
LSM6-203ENST00000503982 NOX5Q96PH1 765 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 NUP58Q9BVL2 599 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 SUN2Q9UH99 717 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 DNAJC12Q9UKB3 198 aa22.86■■□□□ 1.25
LSM6-203ENST00000503982 GTPBP10A4D1E9 387 aaKnown RBP22.85■■□□□ 1.25
LSM6-203ENST00000503982 ARHGAP33O14559 1287 aa22.85■■□□□ 1.25
LSM6-203ENST00000503982 MOCS3O95396 460 aa22.85■■□□□ 1.25
LSM6-203ENST00000503982 TRUB2O95900 331 aaKnown RBP22.85■■□□□ 1.25
LSM6-203ENST00000503982 DNTTP04053 509 aa22.85■■□□□ 1.25
LSM6-203ENST00000503982 CSRP1P21291 193 aaKnown RBP22.85■■□□□ 1.25
LSM6-203ENST00000503982 RPL34P49207 117 aaKnown RBP22.85■■□□□ 1.25
LSM6-203ENST00000503982 KLHL40Q2TBA0 621 aa22.85■■□□□ 1.25
LSM6-203ENST00000503982 DCAF6Q58WW2 860 aa22.85■■□□□ 1.25
LSM6-203ENST00000503982 ZC3H12AQ5D1E8 599 aaKnown RBP22.85■■□□□ 1.25
LSM6-203ENST00000503982 TMEM110Q86TL2 294 aa22.85■■□□□ 1.25
LSM6-203ENST00000503982 IRF2BP1Q8IU81 584 aa22.85■■□□□ 1.25
LSM6-203ENST00000503982 GANCQ8TET4 914 aa22.85■■□□□ 1.25
LSM6-203ENST00000503982 PPP1R13BQ96KQ4 1090 aa22.85■■□□□ 1.25
LSM6-203ENST00000503982 MUC22E2RYF6 1773 aaPredicted RBP22.85■■□□□ 1.25
LSM6-203ENST00000503982 CEACAM1P13688 526 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 TACR2P21452 398 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 PMLP29590 882 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 SNX16P57768 344 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 CDK17Q00537 523 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 CAMK2GQ13555 558 aaPredicted RBP22.84■■□□□ 1.25
LSM6-203ENST00000503982 RAPGEF1Q13905 1077 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 MS4A13Q5J8X5 152 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 CT47A1Q5JQC4 288 aaPredicted RBP22.84■■□□□ 1.25
LSM6-203ENST00000503982 CCDC183Q5T5S1 534 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 ZCCHC9Q8N567 271 aaKnown RBP22.84■■□□□ 1.25
LSM6-203ENST00000503982 OR2I1PQ8NGU4 316 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 FIBINQ8TAL6 211 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 SHC3Q92529 594 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 TMEM245Q9H330 911 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 CAPN10Q9HC96 672 aa22.84■■□□□ 1.25
LSM6-203ENST00000503982 F5H5T6 163 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 GRAP2O75791 330 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 CSKP41240 450 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 DPCR1Q3MIW9 517 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 TTC31Q49AM3 519 aaPredicted RBP22.83■■□□□ 1.25
LSM6-203ENST00000503982 VWA3BQ502W6 1294 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 EFHC1Q5JVL4 640 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 RNF219Q5W0B1 726 aaPredicted RBP22.83■■□□□ 1.25
LSM6-203ENST00000503982 BEND5Q7L4P6 421 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 KIAA0907Q7Z7F0 614 aaPredicted RBP22.83■■□□□ 1.25
LSM6-203ENST00000503982 DEFB106AQ8N104 65 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 C1orf131Q8NDD1 294 aaKnown RBP22.83■■□□□ 1.25
LSM6-203ENST00000503982 SLC39A13Q96H72 371 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 BTN2A3PQ96KV6 586 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 TUBGCP2Q9BSJ2 902 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 NDST4Q9H3R1 872 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms