RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 TTLL4Q14679 1199 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 KPNB1Q14974 876 aaKnown RBP5.32□□□□□ -1.56
CLDND1-208ENST00000503004 MTFR1Q15390 333 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 CYTH1Q15438 398 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 CCDC142Q17RM4 750 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 LRRC36Q1X8D7 754 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 PARP6Q2NL67 630 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 GLRA4Q5JXX5 417 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 FAXCQ5TGI0 409 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 OR6B2Q6IFH4 312 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 C1orf228Q6PIY5 440 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 DSTYKQ6XUX3 929 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 PPP1R21Q6ZMI0 780 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 CYP4V2Q6ZWL3 525 aaPredicted RBP5.32□□□□□ -1.56
CLDND1-208ENST00000503004 SCUBE3Q8IX30 993 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 PPIL6Q8IXY8 311 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 DCLK2Q8N568 766 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 NAT8LQ8N9F0 302 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 DENND1AQ8TEH3 1009 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 FNIP1Q8TF40 1166 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 RXFP2Q8WXD0 754 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 ERLEC1Q96DZ1 483 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 TTC25Q96NG3 672 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 OLFM3Q96PB7 478 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 PAFAH2Q99487 392 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 CCDC28BQ9BUN5 200 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 B3GNT5Q9BYG0 378 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 MAGEB5Q9BZ81 275 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 NGRNQ9NPE2 291 aaKnown RBP5.32□□□□□ -1.56
CLDND1-208ENST00000503004 UBN1Q9NPG3 1134 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 ADARB2Q9NS39 739 aaKnown RBP5.32□□□□□ -1.56
CLDND1-208ENST00000503004 PRMT7Q9NVM4 692 aaPredicted RBP5.32□□□□□ -1.56
CLDND1-208ENST00000503004 ZMAT5Q9UDW3 170 aaKnown RBP5.32□□□□□ -1.56
CLDND1-208ENST00000503004 PRKAG3Q9UGI9 489 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 XPO7Q9UIA9 1087 aaKnown RBP5.32□□□□□ -1.56
CLDND1-208ENST00000503004 RABGEF1Q9UJ41 708 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 PHTF1Q9UMS5 762 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 TRIM17Q9Y577 477 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 ACTL7BQ9Y614 415 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 ANK1P16157 1881 aa5.32□□□□□ -1.56
CLDND1-208ENST00000503004 E9PBE3 544 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 APOC4-APOC2K7ER74 178 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 MCF2LO15068 1137 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 OPHN1O60890 802 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 ABCB7O75027 752 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 MTRF1O75570 445 aaKnown RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 IL18RAPO95256 599 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 TRUB2O95900 331 aaKnown RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 ZBED1O96006 694 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 APOC2P02655 101 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 TFE3P19532 575 aaPredicted RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 ADRA1DP25100 572 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 PHKA2P46019 1235 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 TMED10P49755 219 aaKnown RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 SLC26A2P50443 739 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 ATXN1P54253 815 aaKnown RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 ARHGAP1Q07960 439 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 TMEM132DQ14C87 1099 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 GSTA3Q16772 222 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 KIZQ2M2Z5 673 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 TUSC1Q2TAM9 212 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 MYLK3Q32MK0 819 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 ARL13BQ3SXY8 428 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 ANKDD1AQ495B1 522 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 PPP1R26Q5T8A7 1209 aaPredicted RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 PMF1Q6P1K2 205 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 LVRNQ6Q4G3 990 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 FAM183BPQ6ZVS7 135 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 PATL1Q86TB9 770 aaKnown RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 SATL1Q86VE3 508 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 PALM2Q8IXS6 379 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 BBS5Q8N3I7 341 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 CMASQ8NFW8 434 aaPredicted RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 CEP70Q8NHQ1 597 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 MCRS1Q96EZ8 462 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 TRIM56Q9BRZ2 755 aaKnown RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 FOXP3Q9BZS1 431 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 USP29Q9HBJ7 922 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 KRT82Q9NSB4 513 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 DDX43Q9NXZ2 648 aaKnown RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 RNF181Q9P0P0 153 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 SNX9Q9Y5X1 595 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 NR2E3Q9Y5X4 410 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 GPC6Q9Y625 555 aaPredicted RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 OTOFQ9HC10 1997 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 SCN1AP35498 2009 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 TRIP11Q15643 1979 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 MKI67P46013 3256 aaKnown RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 C2CD4BA6NLJ0 364 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 VILLO15195 856 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 TYROBPO43914 113 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 CSPG5O95196 566 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 MYCP01106 439 aaPredicted RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 PFKMP08237 780 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 GLULP15104 373 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 GJA5P36382 358 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 SCNN1AP37088 669 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 ELK3P41970 407 aa5.31□□□□□ -1.56
CLDND1-208ENST00000503004 ZNF143P52747 638 aaPredicted RBP5.31□□□□□ -1.56
CLDND1-208ENST00000503004 ARL4CP56559 192 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms