RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GAS6Q14393 721 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 C5orf22Q49AR2 442 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 PREPLQ4J6C6 727 aaPredicted RBP25.98■■□□□ 1.75
LSM6-202ENST00000502781 ARTNQ5T4W7 220 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 GRAMD4Q6IC98 578 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 FBXL22Q6P050 247 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 MAMSTRQ6ZN01 415 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 CCDC170Q8IYT3 715 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 LGI2Q8N0V4 545 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 NTAN1Q96AB6 310 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 HAPLN3Q96S86 360 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 IER2Q9BTL4 223 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 GRPEL1Q9HAV7 217 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 TMPRSS4Q9NRS4 437 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 KIAA1549LQ6ZVL6 1849 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 MIA3Q5JRA6 1907 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 F5H5T6 163 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 LCA5LO95447 670 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 APODP05090 189 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 H2AFZP0C0S5 128 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 KDSRQ06136 332 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 H2AFVQ71UI9 128 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 SFTPA1Q8IWL2 248 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 ZNF683Q8IZ20 524 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 ARFGAP1Q8N6T3 406 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 SPC24Q8NBT2 197 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 KMT2EQ8IZD2 1858 aa25.97■■□□□ 1.75
LSM6-202ENST00000502781 TBL1XO60907 577 aa25.96■■□□□ 1.75
LSM6-202ENST00000502781 TMEM253P0C7T8 217 aa25.96■■□□□ 1.75
LSM6-202ENST00000502781 PSMA2P25787 234 aa25.96■■□□□ 1.75
LSM6-202ENST00000502781 Q6ZS52 159 aa25.96■■□□□ 1.75
LSM6-202ENST00000502781 TMTC1Q8IUR5 882 aa25.96■■□□□ 1.75
LSM6-202ENST00000502781 CTNNBL1Q8WYA6 563 aaPredicted RBP25.96■■□□□ 1.75
LSM6-202ENST00000502781 NUP85Q9BW27 656 aa25.96■■□□□ 1.75
LSM6-202ENST00000502781 GOLGA6L3A6NEY3 463 aa25.95■■□□□ 1.75
LSM6-202ENST00000502781 TNFRSF4P43489 277 aa25.95■■□□□ 1.75
LSM6-202ENST00000502781 SCAPQ12770 1279 aa25.95■■□□□ 1.75
LSM6-202ENST00000502781 ARL13BQ3SXY8 428 aa25.95■■□□□ 1.75
LSM6-202ENST00000502781 C14orf80Q86SX3 495 aa25.95■■□□□ 1.75
LSM6-202ENST00000502781 DTWD2Q8NBA8 298 aa25.95■■□□□ 1.75
LSM6-202ENST00000502781 SIK2Q9H0K1 926 aa25.95■■□□□ 1.75
LSM6-202ENST00000502781 TYW5A2RUC4 315 aaKnown RBP25.95■■□□□ 1.74
LSM6-202ENST00000502781 RNF40O75150 1001 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 HLA-FP30511 346 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 GGCXP38435 758 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 KIR2DL1P43626 348 aaPredicted RBP25.95■■□□□ 1.74
LSM6-202ENST00000502781 NRG1Q02297 640 aaPredicted RBP25.95■■□□□ 1.74
LSM6-202ENST00000502781 ACAP1Q15027 740 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 C10orf76Q5T2E6 689 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 TTC39BQ5VTQ0 682 aaPredicted RBP25.95■■□□□ 1.74
LSM6-202ENST00000502781 KIAA0907Q7Z7F0 614 aaPredicted RBP25.95■■□□□ 1.74
LSM6-202ENST00000502781 TMEM139Q8IV31 216 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 CFAP52Q8N1V2 620 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 CCDC185Q8N715 623 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.95■■□□□ 1.74
LSM6-202ENST00000502781 ZNF557Q8N988 423 aaPredicted RBP25.95■■□□□ 1.74
LSM6-202ENST00000502781 CCDC26Q8TAB7 109 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 FIBINQ8TAL6 211 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 WFDC5Q8TCV5 224 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 IGSF8Q969P0 613 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 LMLNQ96KR4 655 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 OSBPL2Q9H1P3 480 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 UVRAGQ9P2Y5 699 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 INTUQ9ULD6 942 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 VANGL2Q9ULK5 521 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 STARD13Q9Y3M8 1113 aa25.95■■□□□ 1.74
LSM6-202ENST00000502781 IGLV3-10A0A075B6K4 115 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 TBC1D3BA6NDS4 549 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 ANTXRLA6NF34 631 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 DRGXA6NNA5 263 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 CHURC1-FNTBB4DL54 471 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 PRRT4C9JH25 899 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 DESP17661 470 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 AIF1P55008 147 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 MTAPQ13126 283 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 RABGAP1LQ5R372 815 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 SPEM1Q8N4L4 309 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 NIPA2Q8N8Q9 360 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 USP33Q8TEY7 942 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 RPRD1AQ96P16 312 aaPredicted RBP25.94■■□□□ 1.74
LSM6-202ENST00000502781 STIM2Q9P246 746 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 SNX10Q9Y5X0 201 aa25.94■■□□□ 1.74
LSM6-202ENST00000502781 SOWAHDA6NJG2 315 aa25.93■■□□□ 1.74
LSM6-202ENST00000502781 LUC7L3O95232 432 aaKnown RBP25.93■■□□□ 1.74
LSM6-202ENST00000502781 GEN1Q17RS7 908 aa25.93■■□□□ 1.74
LSM6-202ENST00000502781 PKN3Q6P5Z2 889 aa25.93■■□□□ 1.74
LSM6-202ENST00000502781 NUDT18Q6ZVK8 323 aa25.93■■□□□ 1.74
LSM6-202ENST00000502781 MFN1Q8IWA4 741 aa25.93■■□□□ 1.74
LSM6-202ENST00000502781 ANAPC7Q9UJX3 599 aa25.93■■□□□ 1.74
LSM6-202ENST00000502781 HCN2Q9UL51 889 aa25.93■■□□□ 1.74
LSM6-202ENST00000502781 EPN1Q9Y6I3 576 aaPredicted RBP25.93■■□□□ 1.74
LSM6-202ENST00000502781 A0A1B0GVM2 712 aa25.92■■□□□ 1.74
LSM6-202ENST00000502781 TCAF2A6NFQ2 919 aa25.92■■□□□ 1.74
LSM6-202ENST00000502781 EIF3CLB5ME19 914 aaKnown RBP25.92■■□□□ 1.74
LSM6-202ENST00000502781 LRCH4O75427 683 aa25.92■■□□□ 1.74
LSM6-202ENST00000502781 CYLC1P35663 651 aaPredicted RBP25.92■■□□□ 1.74
LSM6-202ENST00000502781 IRAK1P51617 712 aa25.92■■□□□ 1.74
LSM6-202ENST00000502781 PIGHQ14442 188 aaPredicted RBP25.92■■□□□ 1.74
LSM6-202ENST00000502781 MANEALQ5VSG8 457 aa25.92■■□□□ 1.74
LSM6-202ENST00000502781 SCYL2Q6P3W7 929 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms