RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TNIP3Q96KP6 325 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 HNRNPABQ99729 332 aaKnown RBP10.14□□□□□ -0.79
CLIP1-204ENST00000501271 PRDM12Q9H4Q4 367 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 XPNPEP3Q9NQH7 507 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 EIF2B3Q9NR50 452 aaKnown RBP10.14□□□□□ -0.79
CLIP1-204ENST00000501271 PIGVQ9NUD9 493 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 CACNG4Q9UBN1 327 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 IPPQ9Y573 584 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 E7ENQ6 273 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 H3BRJ5 948 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 AMHP03971 560 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 PGAM1P18669 254 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 WARSP23381 471 aaKnown RBP10.14□□□□□ -0.79
CLIP1-204ENST00000501271 CNTFP26441 200 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 AXLP30530 894 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 NOS2P35228 1153 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 ADAM17P78536 824 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 DPYSQ14117 519 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 PDE1CQ14123 709 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-204ENST00000501271 KPNB1Q14974 876 aaKnown RBP10.14□□□□□ -0.79
CLIP1-204ENST00000501271 TAF11Q15544 211 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 FASTKD1Q53R41 847 aaKnown RBP10.14□□□□□ -0.79
CLIP1-204ENST00000501271 ACSBG2Q5FVE4 666 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 KIAA0319Q5VV43 1072 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 CLEC20AQ6ZU45 233 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 CRLF3Q8IUI8 442 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 PSTKQ8IV42 348 aaKnown RBP10.14□□□□□ -0.79
CLIP1-204ENST00000501271 NME8Q8N427 588 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 CCNYQ8ND76 341 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 WDR60Q8WVS4 1066 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 MCUR1Q96AQ8 359 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 PGBD4Q96DM1 585 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 ZNF778Q96MU6 729 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 EBF4Q9BQW3 602 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 WWP1Q9H0M0 922 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 ANLNQ9NQW6 1124 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 PPARGC1AQ9UBK2 798 aaKnown RBP10.14□□□□□ -0.79
CLIP1-204ENST00000501271 GNEQ9Y223 722 aaKnown RBP10.14□□□□□ -0.79
CLIP1-204ENST00000501271 NUP205Q92621 2012 aa10.14□□□□□ -0.79
CLIP1-204ENST00000501271 SF3B1O75533 1304 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 BPTFQ12830 3046 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 FAM72CH0Y354 149 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 I6L893 689 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 PTGESO14684 152 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 XPOTO43592 962 aaKnown RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 LYPLA1O75608 230 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 ENO1P06733 434 aaKnown RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 GMPRP36959 345 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 GTF2A2P52657 109 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 RPL10AP62906 217 aaKnown RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 STX3Q13277 289 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 N4BP2L1Q5TBK1 243 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 FAM72AQ5TYM5 149 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 WSCD1Q658N2 575 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 MBLAC2Q68D91 279 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 FAM72DQ6L9T8 149 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 CES3Q6UWW8 571 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 KYAT3Q6YP21 454 aaKnown RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 RFX8Q6ZV50 586 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 PLEKHH3Q7Z736 793 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 FAM72BQ86X60 149 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 TOP6BLQ8N6T0 577 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 TEX9Q8N6V9 391 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 ADAM32Q8TC27 787 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 NAF1Q96HR8 494 aaKnown RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 ZFP42Q96MM3 310 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 SLC2A13Q96QE2 648 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 LBHD1Q9BQE6 289 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 GORASP1Q9BQQ3 440 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 DCLRE1BQ9H816 532 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 KCNK1O00180 336 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 EEF2KO00418 725 aaKnown RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 NRP1O14786 923 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 DCLK1O15075 740 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 ITM2AO43736 263 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 KRT36O76013 467 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 STK10O94804 968 aaKnown RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 PRKCGP05129 697 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 FYNP06241 537 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 ITGA2BP08514 1039 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 ERVK-10P10266 1014 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 FGF3P11487 239 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 PTPN1P18031 435 aaKnown RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 DEUP1Q05D60 604 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 PAFAH1B3Q15102 231 aaKnown RBP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 PDK1Q15118 436 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 OLFML2BQ68BL8 750 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 DPY19L2Q6NUT2 758 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 ANKRD23Q86SG2 305 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 TLK2Q86UE8 772 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 SIX6OS1Q8N1H7 587 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 CDKL2Q92772 493 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 WNT8BQ93098 351 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 LRRC4Q9HBW1 653 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLIP1-204ENST00000501271 THAP1Q9NVV9 213 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 STAP1Q9ULZ2 295 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 LRRC42Q9Y546 428 aa10.13□□□□□ -0.79
CLIP1-204ENST00000501271 MEIS3P2A8K0S8 358 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms