RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, human

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPATCH4-210	ENST00000498756	AP4E1	Q9UPM8	1137 aa		11.18	□□□□□ -0.62
GPATCH4-210	ENST00000498756	NR2E1	Q9Y466	385 aa		11.18	□□□□□ -0.62
GPATCH4-210	ENST00000498756	MFHAS1	Q9Y4C4	1052 aa		11.18	□□□□□ -0.62
GPATCH4-210	ENST00000498756	DRGX	A6NNA5	263 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	KIF5C	O60282	957 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	SRGAP2	O75044	1071 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ECI2	O75521	394 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	CNTN5	O94779	1100 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	LRIG2	O94898	1065 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	APOE	P02649	317 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	KDELR1	P24390	212 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	HARS2	P49590	506 aa	Known RBP	11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	RPS24	P62847	133 aa	Known RBP	11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	FCHO2	Q0JRZ9	810 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ZNF211	Q13398	564 aa	Predicted RBP	11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	GAB4	Q2WGN9	574 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	EML3	Q32P44	896 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ALF	Q53S48	1182 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ADGRF1	Q5T601	910 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	MANEAL	Q5VSG8	457 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	LRRC38	Q5VT99	294 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	NUGGC	Q68CJ6	796 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	MFSD7	Q6UXD7	560 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ZDHHC14	Q8IZN3	488 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	SYCE1	Q8N0S2	351 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	LGI2	Q8N0V4	545 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	SLC44A3	Q8N4M1	653 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	TDRD5	Q8NAT2	981 aa	Known RBP	11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	TRIM58	Q8NG06	486 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	TEKT4	Q8WW24	435 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	TSC1	Q92574	1164 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	CALR3	Q96L12	384 aa	Known RBP	11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	C1orf74	Q96LT6	269 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	PSMB7	Q99436	277 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	DCLK3	Q9C098	648 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	KIF9	Q9HAQ2	790 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	NDFIP2	Q9NV92	336 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ETNK2	Q9NVF9	386 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	OBP2A	Q9NY56	170 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	MPP6	Q9NZW5	540 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	CWC15	Q9P013	229 aa	Known RBP	11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	OR12D3	Q9UGF7	316 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	LCMT1	Q9UIC8	334 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	VANGL2	Q9ULK5	521 aa		11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.17	□□□□□ -0.62
GPATCH4-210	ENST00000498756	GOLGA6L9	A6NEM1	432 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756		E9PAM4	449 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ARNTL	O00327	626 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	NARS	O43776	548 aa	Known RBP	11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	CREB3	O43889	395 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	SLC2A3	P11169	496 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	KRT10	P13645	584 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	GOT1	P17174	413 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	AMPD1	P23109	780 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	CXCR5	P32302	372 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	SLC11A2	P49281	568 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	CDH6	P55285	790 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ETF1	P62495	437 aa	Known RBP	11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	DPYSL3	Q14195	570 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	DPYSL2	Q16555	572 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	HADH	Q16836	314 aa	Known RBP	11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ARL13B	Q3SXY8	428 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	LY6G5C	Q5SRR4	150 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	NAIF1	Q69YI7	327 aa	Predicted RBP	11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	SYT10	Q6XYQ8	523 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	TPGS1	Q6ZTW0	290 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	POLN	Q7Z5Q5	900 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	CHSY1	Q86X52	802 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	TP53INP2	Q8IXH6	220 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	KATNAL2	Q8IYT4	538 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	PQLC3	Q8N755	202 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	OR52K2	Q8NGK3	314 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	PCDH19	Q8TAB3	1148 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	OSCP1	Q8WVF1	389 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	EDA	Q92838	391 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	BHMT	Q93088	406 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	CHFR	Q96EP1	664 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	C16orf45	Q96MC5	204 aa	Predicted RBP	11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	EBF3	Q9H4W6	596 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	DUS2	Q9NX74	493 aa	Known RBP	11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	PLK2	Q9NYY3	685 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ZNF212	Q9UDV6	495 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	RAPGEFL1	Q9UHV5	662 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	SLC12A6	Q9UHW9	1150 aa		11.16	□□□□□ -0.62
GPATCH4-210	ENST00000498756	HELZ	P42694	1942 aa	Known RBP	11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	IGLV3-10	A0A075B6K4	115 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	TCRBV7S2A1N4T	A0A589	114 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	LRRD1	A4D1F6	860 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	ANTXRL	A6NF34	631 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	TRIM24	O15164	1050 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	PSTPIP1	O43586	416 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	LATS1	O95835	1130 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	KRT1	P04264	644 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	CYP17A1	P05093	508 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	KRT7	P08729	469 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	PSMC3	P17980	439 aa		11.15	□□□□□ -0.62
GPATCH4-210	ENST00000498756	GDI1	P31150	447 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms