RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 DEFB106AQ8N104 65 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 GPR161Q8N6U8 529 aaKnown RBP16.75■□□□□ 0.27
LMNA-217ENST00000498722 NAT16Q8N8M0 369 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 DTWD2Q8NBA8 298 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 COG1Q8WTW3 980 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 SPATA6Q9NWH7 488 aaPredicted RBP16.75■□□□□ 0.27
LMNA-217ENST00000498722 ASNSD1Q9NWL6 643 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.75■□□□□ 0.271e-8■■■□□ 16
LMNA-217ENST00000498722 ANAPC7Q9UJX3 599 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 AGO1Q9UL18 857 aaKnown RBP16.75■□□□□ 0.27
LMNA-217ENST00000498722 V9GYY5 206 aaPredicted RBP16.75■□□□□ 0.27
LMNA-217ENST00000498722 WDFY4Q6ZS81 3184 aa16.75■□□□□ 0.27
LMNA-217ENST00000498722 MYO1FO00160 1098 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 TRDMT1O14717 391 aaKnown RBP16.74■□□□□ 0.27
LMNA-217ENST00000498722 GLI1P08151 1106 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 CXCR5P32302 372 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 CHKAP35790 457 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 GSCP56915 257 aaPredicted RBP16.74■□□□□ 0.27
LMNA-217ENST00000498722 KDSRQ06136 332 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 ELF2Q15723 593 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 DGKKQ5KSL6 1271 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 NUGGCQ68CJ6 796 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 CCDC70Q6NSX1 233 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 SLC26A9Q7LBE3 791 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 XYLT1Q86Y38 959 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 UNC45BQ8IWX7 931 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 PSMB7Q99436 277 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 GOLPH3Q9H4A6 298 aa16.74■□□□□ 0.27
LMNA-217ENST00000498722 CCDC66A2RUB6 948 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 TMEM110-MUSTN1A8MSY1 372 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 DDX3YO15523 660 aaKnown RBP16.73■□□□□ 0.27
LMNA-217ENST00000498722 SPOPO43791 374 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 DAB1O75553 588 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 TRUB2O95900 331 aaKnown RBP16.73■□□□□ 0.27
LMNA-217ENST00000498722 MOCS2O96007 188 aaPredicted RBP16.73■□□□□ 0.27
LMNA-217ENST00000498722 EGFP01133 1207 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 CHRNB1P11230 501 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 TYRP14679 529 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 COMTP21964 271 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 CTNNA2P26232 953 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 GBP1P32455 592 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 OPRD1P41143 372 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 MAGEA9P43362 315 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 RPS9P46781 194 aaKnown RBP16.73■□□□□ 0.27
LMNA-217ENST00000498722 GABRB2P47870 512 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 SLC11A2P49281 568 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 DNA2P51530 1060 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 MAMLD1Q13495 774 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 TMEM196Q5HYL7 178 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 FSTL4Q6MZW2 842 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 DNAJC24Q6P3W2 148 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 BEND5Q7L4P6 421 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 PHLDB2Q86SQ0 1253 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 C12orf40Q86WS4 652 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 ACTRT1Q8TDG2 376 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 RNF34Q969K3 372 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 CLDN23Q96B33 292 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 SLC2A13Q96QE2 648 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 PRRX2Q99811 253 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 CARD9Q9H257 536 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 DDIT4Q9NX09 232 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 PLK2Q9NYY3 685 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 DLGAP2Q9P1A6 1054 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 TLR6Q9Y2C9 796 aa16.73■□□□□ 0.27
LMNA-217ENST00000498722 GALR2O43603 387 aaPredicted RBP16.72■□□□□ 0.27
LMNA-217ENST00000498722 APOEP02649 317 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 CYBBP04839 570 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 TUBBP07437 444 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 DRD1P21728 446 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 MAN1A1P33908 653 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 SLC6A11P48066 632 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 PITX1P78337 314 aaPredicted RBP16.72■□□□□ 0.27
LMNA-217ENST00000498722 NME3Q13232 169 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 GAB4Q2WGN9 574 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 ZNF687Q8N1G0 1237 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 RASGEF1CQ8N431 466 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 C3orf20Q8ND61 904 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 DDI1Q8WTU0 396 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 ANKRD7Q92527 254 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 XPO6Q96QU8 1125 aaKnown RBP16.72■□□□□ 0.27
LMNA-217ENST00000498722 PNKPQ96T60 521 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 NAP1L3Q99457 506 aaPredicted RBP16.72■□□□□ 0.27
LMNA-217ENST00000498722 FBRSL1Q9HCM7 1045 aaKnown RBP16.72■□□□□ 0.27
LMNA-217ENST00000498722 METTL5Q9NRN9 209 aaKnown RBP16.72■□□□□ 0.27
LMNA-217ENST00000498722 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.72■□□□□ 0.27
LMNA-217ENST00000498722 IP6K2Q9UHH9 426 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 STAP1Q9ULZ2 295 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 MUC6Q6W4X9 2439 aa16.72■□□□□ 0.27
LMNA-217ENST00000498722 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.71■□□□□ 0.27
LMNA-217ENST00000498722 PGRMC1O00264 195 aaKnown RBP16.71■□□□□ 0.27
LMNA-217ENST00000498722 PDE2AO00408 941 aaPredicted RBP16.71■□□□□ 0.27
LMNA-217ENST00000498722 IRAK2O43187 625 aa16.71■□□□□ 0.27
LMNA-217ENST00000498722 HOXC11O43248 304 aaPredicted RBP16.71■□□□□ 0.27
LMNA-217ENST00000498722 CEP104O60308 925 aa16.71■□□□□ 0.27
LMNA-217ENST00000498722 TSPAN3O60637 253 aa16.71■□□□□ 0.27
LMNA-217ENST00000498722 PROSCO94903 275 aa16.71■□□□□ 0.27
LMNA-217ENST00000498722 IGLV3-27P01718 113 aa16.71■□□□□ 0.27
LMNA-217ENST00000498722 APODP05090 189 aa16.71■□□□□ 0.27
LMNA-217ENST00000498722 CTNNA1P35221 906 aaKnown RBP16.71■□□□□ 0.27
LMNA-217ENST00000498722 NOS2P35228 1153 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms