RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ACE2Q9BYF1 805 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-212ENST00000498540 RSPH9Q9H1X1 276 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-212ENST00000498540 PABPC3Q9H361 631 aaKnown RBP15.31■□□□□ 0.04
TRAF4-212ENST00000498540 KNTC1P50748 2209 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 A0A1B0GVL5 298 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 E9PAM4 449 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 XPO1O14980 1071 aaKnown RBP15.3■□□□□ 0.04
TRAF4-212ENST00000498540 VILLO15195 856 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 KALRNO60229 2985 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 LATS1O95835 1130 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 WNT1P04628 370 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 ATP5BP06576 529 aaKnown RBP15.3■□□□□ 0.04
TRAF4-212ENST00000498540 PRR29P0C7W0 189 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 ZSCAN22P10073 491 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-212ENST00000498540 PFKFB1P16118 471 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 PSMC2P35998 433 aaKnown RBP15.3■□□□□ 0.04
TRAF4-212ENST00000498540 C21orf59P57076 290 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 SLC8A3P57103 927 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 RACK1P63244 317 aaKnown RBP15.3■□□□□ 0.04
TRAF4-212ENST00000498540 ENPEPQ07075 957 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 DNAJC3Q13217 504 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 SHBQ15464 509 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 BSPRYQ5W0U4 402 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 TTC39CQ8N584 583 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 RNF139Q8WU17 664 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 GOLGA1Q92805 767 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 NXPE2Q96DL1 559 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 UBL7Q96S82 380 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-212ENST00000498540 EBF2Q9HAK2 575 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 LRRC4Q9HBW1 653 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 TSPAN16Q9UKR8 245 aa15.3■□□□□ 0.04
TRAF4-212ENST00000498540 GOLGA6L7A0A1B0GV03 622 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 A0A1W2PPC4 97 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 ENC1O14682 589 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 TLX3O43711 291 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-212ENST00000498540 DFNA5O60443 496 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 TBL1XO60907 577 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 SIN3BO75182 1162 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 C1QL1O75973 258 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 POLR2EP19388 210 aaKnown RBP15.29■□□□□ 0.04
TRAF4-212ENST00000498540 SLC6A4P31645 630 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 GTF2H1P32780 548 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 MXI1P50539 228 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 GALCP54803 685 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 DNM1Q05193 864 aaKnown RBP15.29■□□□□ 0.04
TRAF4-212ENST00000498540 FAM133BQ5BKY9 247 aaKnown RBP15.29■□□□□ 0.04
TRAF4-212ENST00000498540 PIK3R6Q5UE93 754 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 NCEH1Q6PIU2 408 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 USP30Q70CQ3 517 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 FBXL13Q8NEE6 735 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 GANCQ8TET4 914 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 EEF2KMTQ96G04 330 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 FAXDC2Q96IV6 333 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 CNDP2Q96KP4 475 aaKnown RBP15.29■□□□□ 0.04
TRAF4-212ENST00000498540 LMLNQ96KR4 655 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 IPO9Q96P70 1041 aaKnown RBP15.29■□□□□ 0.04
TRAF4-212ENST00000498540 ELF4Q99607 663 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-212ENST00000498540 RAB20Q9NX57 234 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 FBXL12Q9NXK8 326 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 SUN2Q9UH99 717 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 NCKAP1Q9Y2A7 1128 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 PCDHGA1Q9Y5H4 931 aa15.29■□□□□ 0.04
TRAF4-212ENST00000498540 FLNBO75369 2602 aaKnown RBP15.28■□□□□ 0.04
TRAF4-212ENST00000498540 A0A1W2PP55 124 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 WNT9AO14904 365 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 MID1O15344 667 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 RFPL3O75679 317 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 RHOBTB3O94955 611 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 IGLV3-27P01718 113 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 MYL1P05976 194 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 JUPP14923 745 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 MCCD1P59942 119 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-212ENST00000498540 SEMG2Q02383 582 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 BST2Q10589 180 aaKnown RBP15.28■□□□□ 0.04
TRAF4-212ENST00000498540 ADAM9Q13443 819 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 PKP1Q13835 747 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 KCNJ12Q14500 433 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 ZCWPW2Q504Y3 356 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 DHX40Q8IX18 779 aaKnown RBP15.28■□□□□ 0.04
TRAF4-212ENST00000498540 SIX6OS1Q8N1H7 587 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 UBA3Q8TBC4 463 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 SAP25Q8TEE9 199 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 PRICKLE1Q96MT3 831 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-212ENST00000498540 ABCC13Q9NSE7 274 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 STIM2Q9P246 746 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 RCOR1Q9UKL0 485 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 INTS6Q9UL03 887 aaKnown RBP15.28■□□□□ 0.04
TRAF4-212ENST00000498540 SCML1Q9UN30 329 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 ASH1LQ9NR48 2969 aaKnown RBP15.28■□□□□ 0.04
TRAF4-212ENST00000498540 PTPRQQ9UMZ3 2332 aa15.28■□□□□ 0.04
TRAF4-212ENST00000498540 C10orf142B7Z368 130 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 LDOC1O95751 146 aaPredicted RBP15.27■□□□□ 0.04
TRAF4-212ENST00000498540 ITGAVP06756 1048 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 ABCB4P21439 1286 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 RPL13P26373 211 aaKnown RBP15.27■□□□□ 0.04
TRAF4-212ENST00000498540 HNF1BP35680 557 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 EIF2S3P41091 472 aaKnown RBP15.27■□□□□ 0.04
TRAF4-212ENST00000498540 CSKP41240 450 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 ACADVLP49748 655 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 DAOAP59103 153 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms