RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 KIAA0907Q7Z7F0 614 aaPredicted RBP14.52□□□□□ -0.09
CCDC58-207ENST00000498466 ZC3H3Q8IXZ2 948 aaKnown RBP14.52□□□□□ -0.09
CCDC58-207ENST00000498466 CEP57L1Q8IYX8 460 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 ZNF843Q8N446 348 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 SAP25Q8TEE9 199 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 RNF139Q8WU17 664 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 NDRG1Q92597 394 aaKnown RBP14.52□□□□□ -0.09
CCDC58-207ENST00000498466 ULBP1Q9BZM6 244 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 NRSN2Q9GZP1 204 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 RSPH9Q9H1X1 276 aaPredicted RBP14.52□□□□□ -0.09
CCDC58-207ENST00000498466 PABPC3Q9H361 631 aaKnown RBP14.52□□□□□ -0.09
CCDC58-207ENST00000498466 MTG2Q9H4K7 406 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 GDF3Q9NR23 364 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 SFMBT1Q9UHJ3 866 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 SCML1Q9UN30 329 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 HBS1LQ9Y450 684 aaKnown RBP14.52□□□□□ -0.09
CCDC58-207ENST00000498466 LRRC72A6NJI9 287 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 YKT6O15498 198 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 CALUO43852 315 aaPredicted RBP14.51□□□□□ -0.09
CCDC58-207ENST00000498466 KLRC4O43908 158 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 RNASEH1O60930 286 aaKnown RBP14.51□□□□□ -0.09
CCDC58-207ENST00000498466 WNT1P04628 370 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 SLFN14P0C7P3 912 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 PDIA4P13667 645 aaKnown RBP14.51□□□□□ -0.09
CCDC58-207ENST00000498466 CD38P28907 300 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 CD70P32970 193 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 ARRB1P49407 418 aaPredicted RBP14.51□□□□□ -0.09
CCDC58-207ENST00000498466 SGSHP51688 502 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 GALCP54803 685 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 ST8SIA6P61647 398 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 PPP3CAQ08209 521 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 SFSWAPQ12872 951 aaKnown RBP14.51□□□□□ -0.09
CCDC58-207ENST00000498466 RTP5Q14D33 572 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 SHBQ15464 509 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 KMT5BQ4FZB7 885 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 PM20D1Q6GTS8 502 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 GPR155Q7Z3F1 870 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 SPDYE1Q8NFV5 336 aaPredicted RBP14.51□□□□□ -0.09
CCDC58-207ENST00000498466 SNIP1Q8TAD8 396 aaKnown RBP14.51□□□□□ -0.09
CCDC58-207ENST00000498466 WFDC5Q8TCV5 224 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 EDEM1Q92611 657 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 TMEM176AQ96HP8 235 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 EBF2Q9HAK2 575 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 SERGEFQ9UGK8 458 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 STOML2Q9UJZ1 356 aa14.51□□□□□ -0.09
CCDC58-207ENST00000498466 COL5A1P20908 1838 aaPredicted RBP14.5□□□□□ -0.09
CCDC58-207ENST00000498466 CABIN1Q9Y6J0 2220 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 MUC22E2RYF6 1773 aaPredicted RBP14.5□□□□□ -0.09
CCDC58-207ENST00000498466 TEX51A0A1B0GUA7 166 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 A0A1W2PP55 124 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 MID1O15344 667 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 TBL1XO60907 577 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 RNASEH2AO75792 299 aaKnown RBP14.5□□□□□ -0.09
CCDC58-207ENST00000498466 LATS1O95835 1130 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 KRT13P13646 458 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 EPHA8P29322 1005 aaPredicted RBP14.5□□□□□ -0.09
CCDC58-207ENST00000498466 FBXL19Q6PCT2 694 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 INTS8Q75QN2 995 aaKnown RBP14.5□□□□□ -0.09
CCDC58-207ENST00000498466 BHLHA9Q7RTU4 235 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 DHX40Q8IX18 779 aaKnown RBP14.5□□□□□ -0.09
CCDC58-207ENST00000498466 TTC39CQ8N584 583 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 ANKRD52Q8NB46 1076 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 SLC4A11Q8NBS3 891 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 OR2T34Q8NGX1 318 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 FGF11Q92914 225 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 INTS4Q96HW7 963 aaKnown RBP14.5□□□□□ -0.09
CCDC58-207ENST00000498466 IPO9Q96P70 1041 aaKnown RBP14.5□□□□□ -0.09
CCDC58-207ENST00000498466 OMDQ99983 421 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 NEUROG2Q9H2A3 272 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 LRRC4Q9HBW1 653 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 CISHQ9NSE2 258 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 KNL1Q8NG31 2342 aa14.5□□□□□ -0.09
CCDC58-207ENST00000498466 ATMQ13315 3056 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 TULP2O00295 520 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 MAPK13O15264 365 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 MSI1O43347 362 aaKnown RBP14.49□□□□□ -0.09
CCDC58-207ENST00000498466 BRINP1O60477 761 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 SIN3BO75182 1162 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 NR2F2P24468 414 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 ME1P48163 572 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 RAD23BP54727 409 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 CXADRP78310 365 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 CCDC173Q0VFZ6 552 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 CST6Q15828 149 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 GOLGA7BQ2TAP0 167 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 FOXD4L6Q3SYB3 417 aaPredicted RBP14.49□□□□□ -0.09
CCDC58-207ENST00000498466 BSPRYQ5W0U4 402 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 ARHGAP17Q68EM7 881 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 RFWD3Q6PCD5 774 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 FOXD4L3Q6VB84 417 aaPredicted RBP14.49□□□□□ -0.09
CCDC58-207ENST00000498466 MMAAQ8IVH4 418 aaKnown RBP14.49□□□□□ -0.09
CCDC58-207ENST00000498466 MFN1Q8IWA4 741 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 TSC1Q92574 1164 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 SERAC1Q96JX3 654 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 TMEM8AQ9HCN3 771 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 STIM2Q9P246 746 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 SERTAD1Q9UHV2 236 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 TENM4Q6N022 2769 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 SHROOM3Q8TF72 1996 aa14.49□□□□□ -0.09
CCDC58-207ENST00000498466 A0A1W2PR77 199 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms