RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 SGK2Q9HBY8 427 aa16.73■□□□□ 0.27
MUC1-220ENST00000498431 RAB20Q9NX57 234 aa16.73■□□□□ 0.27
MUC1-220ENST00000498431 HPSEQ9Y251 543 aa16.73■□□□□ 0.27
MUC1-220ENST00000498431 A0A1B0GTQ1 180 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 FAM47DPA6NHR8 397 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 PLK4O00444 970 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 PAPSS1O43252 624 aaPredicted RBP16.72■□□□□ 0.27
MUC1-220ENST00000498431 TBL1XO60907 577 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 WNT1P04628 370 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 SLC6A4P31645 630 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 GTF2H1P32780 548 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 SLC8A3P57103 927 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 TTC31Q49AM3 519 aaPredicted RBP16.72■□□□□ 0.27
MUC1-220ENST00000498431 ZNF776Q68DI1 518 aaPredicted RBP16.72■□□□□ 0.27
MUC1-220ENST00000498431 KIAA0895LQ68EN5 471 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 ATL3Q6DD88 541 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 TTC39CQ8N584 583 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 UBA3Q8TBC4 463 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 RNF139Q8WU17 664 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 SNX21Q969T3 373 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 LMLNQ96KR4 655 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 IPO9Q96P70 1041 aaKnown RBP16.72■□□□□ 0.27
MUC1-220ENST00000498431 FBRSQ9HAH7 460 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 LRRC4Q9HBW1 653 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 FTSJ1Q9UET6 329 aa16.72■□□□□ 0.27
MUC1-220ENST00000498431 COL5A1P20908 1838 aaPredicted RBP16.72■□□□□ 0.27
MUC1-220ENST00000498431 GABBR2O75899 941 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 LATS1O95835 1130 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 PRB1P04280 392 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 MYL1P05976 194 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 ATP5BP06576 529 aaKnown RBP16.71■□□□□ 0.27
MUC1-220ENST00000498431 POLR2EP19388 210 aaKnown RBP16.71■□□□□ 0.27
MUC1-220ENST00000498431 CMA1P23946 247 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 ZNF445P59923 1031 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 RACK1P63244 317 aaKnown RBP16.71■□□□□ 0.27
MUC1-220ENST00000498431 BST2Q10589 180 aaKnown RBP16.71■□□□□ 0.27
MUC1-220ENST00000498431 DPYDQ12882 1025 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 DNAJC3Q13217 504 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 SHBQ15464 509 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 FAM133BQ5BKY9 247 aaKnown RBP16.71■□□□□ 0.27
MUC1-220ENST00000498431 PIK3R6Q5UE93 754 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 GUF1Q8N442 669 aaKnown RBP16.71■□□□□ 0.27
MUC1-220ENST00000498431 PIP4K2CQ8TBX8 421 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 MYEOVQ96EZ4 313 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 FAXDC2Q96IV6 333 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 RSPH9Q9H1X1 276 aaPredicted RBP16.71■□□□□ 0.27
MUC1-220ENST00000498431 PABPC3Q9H361 631 aaKnown RBP16.71■□□□□ 0.27
MUC1-220ENST00000498431 USP25Q9UHP3 1055 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 INTS6Q9UL03 887 aaKnown RBP16.71■□□□□ 0.27
MUC1-220ENST00000498431 CFAP45Q9UL16 551 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 CFAP46Q8IYW2 2715 aa16.71■□□□□ 0.27
MUC1-220ENST00000498431 ASH1LQ9NR48 2969 aaKnown RBP16.71■□□□□ 0.26
MUC1-220ENST00000498431 ATMQ13315 3056 aa16.71■□□□□ 0.26
MUC1-220ENST00000498431 KNTC1P50748 2209 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 MGAQ8IWI9 3026 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 SHROOM3Q8TF72 1996 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 A0A1W2PPC4 97 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 EIF4E1BA6NMX2 242 aaKnown RBP16.7■□□□□ 0.26
MUC1-220ENST00000498431 WNT9AO14904 365 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 VILLO15195 856 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 SIN3BO75182 1162 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 IGLV3-27P01718 113 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 LCP1P13796 627 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 RPL13P26373 211 aaKnown RBP16.7■□□□□ 0.26
MUC1-220ENST00000498431 ITPKBP27987 946 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 GALCP54803 685 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 C21orf59P57076 290 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 DAOAP59103 153 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 KCNJ12Q14500 433 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 CBWD6Q4V339 395 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 SGO2Q562F6 1265 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 CBWD3Q5JTY5 395 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 CBWD5Q5RIA9 395 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 NADSYN1Q6IA69 706 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 NCEH1Q6PIU2 408 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 TMPRSS12Q86WS5 348 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 ADAM32Q8TC27 787 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 GANCQ8TET4 914 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 GOLGA1Q92805 767 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 PRICKLE1Q96MT3 831 aaPredicted RBP16.7■□□□□ 0.26
MUC1-220ENST00000498431 ACE2Q9BYF1 805 aaPredicted RBP16.7■□□□□ 0.26
MUC1-220ENST00000498431 ABCC13Q9NSE7 274 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 FBXL12Q9NXK8 326 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 STIM2Q9P246 746 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 SUN2Q9UH99 717 aa16.7■□□□□ 0.26
MUC1-220ENST00000498431 A0A1W2PP55 124 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 PIK3R2O00459 728 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 ENC1O14682 589 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 MID1O15344 667 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 CD19P15391 556 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 ABCG1P45844 678 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 NDUFA8P51970 172 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 HNRNPA1L2Q32P51 320 aaKnown RBP16.69■□□□□ 0.26
MUC1-220ENST00000498431 INAVAQ3KP66 663 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 PKDCCQ504Y2 493 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 MSANTD2Q6P1R3 559 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 USP30Q70CQ3 517 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 HSCBQ8IWL3 235 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 DHX40Q8IX18 779 aaKnown RBP16.69■□□□□ 0.26
MUC1-220ENST00000498431 SMYD4Q8IYR2 804 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms