RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.81□□□□□ -1.96
RBM39-242ENST00000498280 NUAK2Q9H093 628 aa2.81□□□□□ -1.96
RBM39-242ENST00000498280 PCDHAC1Q9H158 963 aa2.81□□□□□ -1.96
RBM39-242ENST00000498280 RGL1Q9NZL6 768 aa2.81□□□□□ -1.96
RBM39-242ENST00000498280 SEMA5BQ9P283 1151 aa2.81□□□□□ -1.96
RBM39-242ENST00000498280 IGSF9Q9P2J2 1179 aa2.81□□□□□ -1.96
RBM39-242ENST00000498280 ZMYND8Q9ULU4 1186 aaPredicted RBP2.81□□□□□ -1.96
RBM39-242ENST00000498280 PCDHA12Q9UN75 941 aa2.81□□□□□ -1.96
RBM39-242ENST00000498280 SLC27A6Q9Y2P4 619 aa2.81□□□□□ -1.96
RBM39-242ENST00000498280 TRBV5-3A0A0A0MS03 114 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 AQP12BA6NM10 295 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 LGALS16A8MUM7 142 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 PIP5K1BO14986 540 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 FFAR2O15552 330 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 CTIFO43310 598 aaKnown RBP2.8□□□□□ -1.96
RBM39-242ENST00000498280 TLX3O43711 291 aaPredicted RBP2.8□□□□□ -1.96
RBM39-242ENST00000498280 ARP10275 920 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 ST6GAL1P15907 406 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 PECAM1P16284 738 aaPredicted RBP2.8□□□□□ -1.96
RBM39-242ENST00000498280 PDIA3P30101 505 aaKnown RBP2.8□□□□□ -1.96
RBM39-242ENST00000498280 HTR7P34969 479 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 CHKAP35790 457 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 P2RX3P56373 397 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 RAE1P78406 368 aaKnown RBP2.8□□□□□ -1.96
RBM39-242ENST00000498280 ICA1Q05084 483 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 GALNT1Q10472 559 aaPredicted RBP2.8□□□□□ -1.96
RBM39-242ENST00000498280 GAB1Q13480 694 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 PUM3Q15397 648 aaKnown RBP2.8□□□□□ -1.96
RBM39-242ENST00000498280 RAB30Q15771 203 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 FAM110CQ1W6H9 321 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.8□□□□□ -1.96
RBM39-242ENST00000498280 GORABQ5T7V8 394 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 TTLL5Q6EMB2 1281 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 CAPRIN2Q6IMN6 1127 aaKnown RBP2.8□□□□□ -1.96
RBM39-242ENST00000498280 B4GALNT4Q76KP1 1039 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 CCDC28AQ8IWP9 274 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 PNPLA1Q8N8W4 532 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 CHMP4AQ9BY43 222 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 EIF2AQ9BY44 585 aaKnown RBP2.8□□□□□ -1.96
RBM39-242ENST00000498280 MYLK2Q9H1R3 596 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 SLC25A32Q9H2D1 315 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 FAM83DQ9H4H8 585 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 OBP2BQ9NPH6 170 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 TM7SF3Q9NS93 570 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 VPS4AQ9UN37 437 aa2.8□□□□□ -1.96
RBM39-242ENST00000498280 LOC102724159A0A0B4J2E5 919 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 PLEKHD1A6NEE1 506 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 HNRNPDLO14979 420 aaKnown RBP2.79□□□□□ -1.96
RBM39-242ENST00000498280 NPC1O15118 1278 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 UGDHO60701 494 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 EIF3JO75822 258 aaKnown RBP2.79□□□□□ -1.96
RBM39-242ENST00000498280 TNFRSF6BO95407 300 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 EGR1P18146 543 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 ADRA1DP25100 572 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 MST1P26927 711 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 WDR5P61964 334 aaKnown RBP2.79□□□□□ -1.96
RBM39-242ENST00000498280 MTAPQ13126 283 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 MTA1Q13330 715 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 DHX8Q14562 1220 aaKnown RBP2.79□□□□□ -1.96
RBM39-242ENST00000498280 KRT72Q14CN4 511 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 PWP2Q15269 919 aaKnown RBP2.79□□□□□ -1.96
RBM39-242ENST00000498280 MAPKAPK3Q16644 382 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 PFKFB4Q16877 469 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 SLC5A9Q2M3M2 681 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 CCDC38Q502W7 563 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 FAXCQ5TGI0 409 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 ANO1Q5XXA6 986 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 DENND2CQ68D51 928 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 ZNF324BQ6AW86 544 aaPredicted RBP2.79□□□□□ -1.96
RBM39-242ENST00000498280 MRNIPQ6NTE8 343 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 PGBD2Q6P3X8 592 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 PDXDC1Q6P996 788 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 USP17L6PQ6QN14 398 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 FAM57BQ71RH2 274 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 SMC5Q8IY18 1101 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 FAM71DQ8N9W8 422 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 ATG16L2Q8NAA4 619 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 WFIKKN2Q8TEU8 576 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 STYXQ8WUJ0 223 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 OIT3Q8WWZ8 545 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 PIGKQ92643 395 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 NEUROG1Q92886 237 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 FAM227BQ96M60 508 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 SLITRK1Q96PX8 696 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 HIST1H2AAQ96QV6 131 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 POLR3GLQ9BT43 218 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 MOV10Q9HCE1 1003 aaKnown RBP2.79□□□□□ -1.96
RBM39-242ENST00000498280 ZBTB26Q9HCK0 441 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 LRFN1Q9P244 771 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 DNAJB11Q9UBS4 358 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 NKX1-2Q9UD57 310 aaPredicted RBP2.79□□□□□ -1.96
RBM39-242ENST00000498280 VPS51Q9UID3 782 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 ERRFI1Q9UJM3 462 aaPredicted RBP2.79□□□□□ -1.96
RBM39-242ENST00000498280 MAFFQ9ULX9 164 aa2.79□□□□□ -1.96
RBM39-242ENST00000498280 HEMK1Q9Y5R4 338 aaPredicted RBP2.79□□□□□ -1.96
RBM39-242ENST00000498280 GOLGA6L3A6NEY3 463 aa2.78□□□□□ -1.96
RBM39-242ENST00000498280 A6NNC1 897 aa2.78□□□□□ -1.96
RBM39-242ENST00000498280 A8MVJ9 347 aa2.78□□□□□ -1.96
RBM39-242ENST00000498280 LINC01565O15544 149 aa2.78□□□□□ -1.96
RBM39-242ENST00000498280 ASNA1O43681 348 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms