RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 NONOQ15233 471 aaKnown RBP eCLIP4.45□□□□□ -1.7
USP54-217ENST00000498213 KIAA0753Q2KHM9 967 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 MUM1Q2TAK8 710 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 MST1LQ2TV78 715 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 MUM1L1Q5H9M0 696 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 TOR2AQ5JU69 321 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 DRICH1Q6PGQ1 229 aaPredicted RBP4.45□□□□□ -1.7
USP54-217ENST00000498213 DGKHQ86XP1 1220 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 SPATS2Q86XZ4 545 aaKnown RBP4.45□□□□□ -1.7
USP54-217ENST00000498213 CMTR2Q8IYT2 770 aaKnown RBP4.45□□□□□ -1.7
USP54-217ENST00000498213 ULK2Q8IYT8 1036 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 CHCHD4Q8N4Q1 142 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 DEFB124Q8NES8 71 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 GPR156Q8NFN8 814 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 NSUN6Q8TEA1 469 aaKnown RBP4.45□□□□□ -1.7
USP54-217ENST00000498213 APBB2Q92870 758 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 CHMP4CQ96CF2 233 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 DYNLL2Q96FJ2 89 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 CEP95Q96GE4 821 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 REXO4Q9GZR2 422 aaKnown RBP4.45□□□□□ -1.7
USP54-217ENST00000498213 NAPBQ9H115 298 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 RANBP17Q9H2T7 1088 aaKnown RBP4.45□□□□□ -1.7
USP54-217ENST00000498213 TMX1Q9H3N1 280 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 DCTPP1Q9H773 170 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 CYP4F11Q9HBI6 524 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 DNAJC28Q9NX36 388 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 EXOC6BQ9Y2D4 811 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 PRKAB1Q9Y478 270 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 PAXBP1Q9Y5B6 917 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 SCN10AQ9Y5Y9 1956 aa4.45□□□□□ -1.7
USP54-217ENST00000498213 COL12A1Q99715 3063 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 ACACAQ13085 2346 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 FBN3Q75N90 2809 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 GAGE12BA1L429 117 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 GAGE12HA6NDE8 117 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 TSPY2A6NKD2 308 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 SHISA7A6NL88 538 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 TMEM232C9JQI7 657 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 EIF3JO75822 258 aaKnown RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 NCR1O76036 304 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 ARIH2O95376 493 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 SNHG28P0DPA3 235 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 RAP2AP10114 183 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 CYP2D6P10635 497 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 GHRP10912 638 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 TOP1P11387 765 aaKnown RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 ALAS1P13196 640 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 ALDH5A1P51649 535 aaPredicted RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 NANOS3P60323 173 aaKnown RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 SNAP25P60880 206 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 RAP2BP61225 183 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 GPC5P78333 572 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 SRSF2Q01130 221 aaKnown RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 CFHR1Q03591 330 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 NOMO1Q15155 1222 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 ADRM1Q16186 407 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 RRP12Q5JTH9 1297 aaKnown RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 ATXN7L2Q5T6C5 722 aaPredicted RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 ANKS6Q68DC2 871 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 SERINC5Q86VE9 423 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 CMIPQ8IY22 773 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 OR7D4Q8NG98 312 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 PPTC7Q8NI37 304 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 TSPEARQ8WU66 669 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 LMBR1Q8WVP7 490 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 KLHL5Q96PQ7 755 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 RPP25Q9BUL9 199 aaKnown RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 MLST8Q9BVC4 326 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 FAM126AQ9BYI3 521 aaPredicted RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 PUS7LQ9H0K6 701 aaKnown RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 BOLA2Q9H3K6 86 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 ZNF768Q9H5H4 540 aaKnown RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 WDR26Q9H7D7 661 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 BCO1Q9HAY6 547 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 IL1RAPL2Q9NP60 686 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 LTB4R2Q9NPC1 389 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 AKIP1Q9NQ31 210 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 PRMT8Q9NR22 394 aaPredicted RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 HELLSQ9NRZ9 838 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 RBM12Q9NTZ6 932 aaKnown RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 MOCS1Q9NZB8 636 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 MCM8Q9UJA3 840 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 CCPG1Q9ULG6 757 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.44□□□□□ -1.7
USP54-217ENST00000498213 SQORQ9Y6N5 450 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 GREB1LQ9C091 1923 aaPredicted RBP4.44□□□□□ -1.7
USP54-217ENST00000498213 ABCB11O95342 1321 aa4.44□□□□□ -1.7
USP54-217ENST00000498213 NAV1Q8NEY1 1877 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 FBN2P35556 2912 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 SPAARA0A1B0GVQ0 90 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 AHRRA9YTQ3 701 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 HIP1O00291 1037 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 LEFTY2O00292 366 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 GPR39O43194 453 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 PRKAB2O43741 272 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 B3GALT2O43825 422 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 ENDOD1O94919 500 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 RHOBTB3O94955 611 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 NDUFA10O95299 355 aa4.43□□□□□ -1.7
USP54-217ENST00000498213 GH1P01241 217 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms