RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 COMPP49747 757 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 CSRP3P50461 194 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 AP2B1P63010 937 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 UBXN2AP68543 259 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TLE2Q04725 743 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 BCL2L1Q07817 233 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RESTQ13127 1097 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GPS2Q13227 327 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RSPO4Q2I0M5 234 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 HLA-DQA1Q5Y7H0 255 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 REP15Q6BDI9 236 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 KIAA1841Q6NSI8 718 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 OLFML1Q6UWY5 402 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 UNQ6494/PRO21346Q6UXR6 183 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RAD9BQ6WBX8 426 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZPBP2Q6X784 338 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RRAGAQ7L523 313 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 DOK3Q7L591 496 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 KCNK18Q7Z418 384 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CCDC91Q7Z6B0 441 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 OOSP2Q86WS3 158 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CCDC28AQ8IWP9 274 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 LILRA3Q8N6C8 439 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 FAM133AQ8N9E0 248 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 USP38Q8NB14 1042 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SPC24Q8NBT2 197 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SMG8Q8ND04 991 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 SH3TC2Q8TF17 1288 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZNF296Q8WUU4 475 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 LEO1Q8WVC0 666 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 EZH1Q92800 747 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 NEUROG1Q92886 237 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RNPC3Q96LT9 517 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 DMRTB1Q96MA1 342 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 NECTIN4Q96NY8 510 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 FNBP1Q96RU3 617 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TRIB3Q96RU7 358 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CSF3RQ99062 836 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 MARVELD1Q9BSK0 173 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SPATA16Q9BXB7 569 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SERHL2Q9H4I8 314 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TBC1D17Q9HA65 648 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 BEX4Q9NWD9 120 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 LMCD1Q9NZU5 365 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ATXN10Q9UBB4 475 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TLK1Q9UKI8 766 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SNX6Q9UNH7 406 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TCAF1Q9Y4C2 921 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PCDHB4Q9Y5E5 795 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 DDX49Q9Y6V7 483 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 DOPEY1Q5JWR5 2465 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SNRNP200O75643 2136 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 E9PCH4 1651 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CDHR2Q9BYE9 1310 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 A0A1B0GTH9 108 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 FAM95CA0A1B0GW59 222 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ISPDA4D126 451 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 F8W031 263 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 H3BUI4 141 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 FXYD1O00168 92 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 BMPR1BO00238 502 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZNF862O60290 1169 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 EIF4E2O60573 245 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 TRMUO75648 421 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 GLRX3O76003 335 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 NTN1O95631 604 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GJB1P08034 283 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ZSCAN22P10073 491 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 FDPSP14324 419 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 TCP1P17987 556 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 PLOD1Q02809 727 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 BNIP1Q12981 228 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PPP2R5CQ13362 524 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ORC2Q13416 577 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 GTF2H2Q13888 395 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SERTAD2Q14140 314 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SEPT7Q16181 437 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 HLFQ16534 295 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TAZQ16635 292 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 CCDC142Q17RM4 750 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GARNL3Q5VVW2 1013 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GTF2H2CQ6P1K8 395 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TATDN1Q6P1N9 297 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 GDPD4Q6W3E5 623 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 KRBA2Q6ZNG9 492 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 Q6ZNX1 250 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 EIF3MQ7L2H7 374 aaKnown RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 CYFIP1Q7L576 1253 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 TMPRSS11BQ86T26 416 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 ATCAYQ86WG3 371 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 IFNL3Q8IZI9 196 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 OR4D10Q8NGI6 311 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SEC16BQ96JE7 1060 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 EGLN2Q96KS0 407 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 RNF145Q96MT1 663 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 PSMD1Q99460 953 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SDHCQ99643 169 aaPredicted RBP1.5□□□□□ -2.17
XRN1-214ENST00000498077 PBX4Q9BYU1 374 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 MTMR12Q9C0I1 747 aa1.5□□□□□ -2.17
XRN1-214ENST00000498077 SENP6Q9GZR1 1112 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms