RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 DUSP4Q13115 394 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 KCNJ11Q14654 390 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 PPP2R5DQ14738 602 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 PDK1Q15118 436 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 PRKD1Q15139 912 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 UBAP2Q5T6F2 1119 aaKnown RBP8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 FAXCQ5TGI0 409 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 FAM72AQ5TYM5 149 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 ANKRD22Q5VYY1 191 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 FAM72DQ6L9T8 149 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 C4orf22Q6V702 233 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 ARHGEF18Q6ZSZ5 1173 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 CENPUQ71F23 418 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 OTOP2Q7RTS6 562 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 MON1AQ86VX9 555 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 FAM72BQ86X60 149 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 VPS52Q8N1B4 723 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 ZNF454Q8N9F8 522 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 UHMK1Q8TAS1 419 aaKnown RBP8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 GIPC2Q8TF65 315 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 CPT1BQ92523 772 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 ARL8AQ96BM9 186 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 ATP6V1G3Q96LB4 118 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 PWWP2AQ96N64 755 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 TTC25Q96NG3 672 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 RBM15Q96T37 977 aaKnown RBP eCLIP8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 NOTCH4Q99466 2003 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 ADAM7Q9H2U9 754 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 SEMA4AQ9H3S1 761 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 TMBIM4Q9HC24 238 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 COMMD8Q9NX08 183 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 OSER1Q9NX31 292 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 SPG21Q9NZD8 308 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 AFF4Q9UHB7 1163 aaKnown RBP8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 NUDT5Q9UKK9 219 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 MAGED2Q9UNF1 606 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 NEU3Q9UQ49 428 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 SLC27A5Q9Y2P5 690 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 RAD54BQ9Y620 910 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 CLUHO75153 1309 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 A0A0A0MRY4 1105 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 FAM92AA1XBS5 289 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 H0YGN5 161 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 GOLGA8MH3BSY2 632 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 RNF103O00237 685 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 EIF3HO15372 352 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 PAGE1O75459 146 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 SHBGP04278 402 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 ABHD2P08910 425 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 SLC2A3P11169 496 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 HOXB1P14653 301 aaPredicted RBP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 NR1D1P20393 614 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 EPHB2P29323 1055 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 HOXC13P31276 330 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 HCAR3P49019 387 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 PGFP49763 221 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 CREMQ03060 361 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 AP1B1Q10567 949 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 SLC10A2Q12908 348 aaPredicted RBP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 TAF10Q12962 218 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 PDIA2Q13087 525 aaKnown RBP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 PLD1Q13393 1074 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 VEPH1Q14D04 833 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 TRIP4Q15650 581 aaPredicted RBP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 C10orf120Q5SQS8 335 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 AGBL2Q5U5Z8 902 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 RWDD4Q6NW29 188 aaKnown RBP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 PSRC1Q6PGN9 363 aaPredicted RBP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 CROCCP2Q86T23 111 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 ZBED8Q8IZ13 594 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 C7orf61Q8IZ16 206 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 SH2D3CQ8N5H7 860 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 ATPAF2Q8N5M1 289 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 NPWQ8N729 165 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 ATP6V0D2Q8N8Y2 350 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 NAT8LQ8N9F0 302 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 ATP11CQ8NB49 1132 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 PDZD8Q8NEN9 1154 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 CCDC110Q8TBZ0 833 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 EPS8L3Q8TE67 593 aaKnown RBP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 HTR3CQ8WXA8 447 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 HDAC11Q96DB2 347 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 PKNOX2Q96KN3 472 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 FCRL2Q96LA5 508 aaPredicted RBP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 C9orf72Q96LT7 481 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 CEP295NLQ96MC4 621 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 SPATA13Q96N96 652 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 CDK5RAP1Q96SZ6 601 aaKnown RBP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 TTLL2Q9BWV7 592 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 SIK2Q9H0K1 926 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 CATSPERBQ9H7T0 1116 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 RAB6BQ9NRW1 208 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 TMEM51Q9NW97 253 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 CLIC5Q9NZA1 410 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 IL37Q9NZH6 218 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 SEPT10Q9P0V9 454 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 OR12D3Q9UGF7 316 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 XPO7Q9UIA9 1087 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms