RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 COMMD8Q9NX08 183 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 MARCH2Q9P0N8 246 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 SEPT10Q9P0V9 454 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 PLXNA4Q9HCM2 1894 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 SMIM23A6NLE4 172 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 TLR5O60602 858 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 FGF18O76093 207 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 TTC4O95801 387 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 HMBSP08397 361 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 MAGEA4P43358 317 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 EIF3BP55884 814 aaKnown RBP18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 KCNJ11Q14654 390 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 TPGS2Q68CL5 300 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 PDZD4Q76G19 769 aaPredicted RBP18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 FIBCD1Q8N539 461 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 SLC39A13Q96H72 371 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 TMBIM4Q9HC24 238 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 MRPL17Q9NRX2 175 aaKnown RBP18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 HS3ST4Q9Y661 456 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 F5H423 210 aaPredicted RBP18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 RNF103O00237 685 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 APOEP02649 317 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 ZDHHC11BP0C7U3 371 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 SYN1P17600 705 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 SERPINB6P35237 376 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 HTRA4P83105 476 aaPredicted RBP18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 PDIA2Q13087 525 aaKnown RBP18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 PIK3R6Q5UE93 754 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 MANEALQ5VSG8 457 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 ARHGEF18Q6ZSZ5 1173 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 CEP128Q6ZU80 1094 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 CENPUQ71F23 418 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 ZBED8Q8IZ13 594 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 P2RY11Q96G91 374 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 CELF6Q96J87 481 aaKnown RBP18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 ZNF512Q96ME7 567 aaPredicted RBP18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 KLC2Q9H0B6 622 aa18.33■□□□□ 0.52
CHRNA4-206ENST00000498043 SLC12A8A0AV02 714 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 CARNS1A5YM72 827 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 PRRG1O14668 218 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 GCATO75600 419 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 METTL18O95568 372 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 LINC00271P0C7V0 271 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 ARL4CP56559 192 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 TMEM240Q5SV17 173 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 FNBP1LQ5T0N5 605 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 RELL1Q8IUW5 271 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 CCDC13Q8IYE1 715 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 EPS8L3Q8TE67 593 aaKnown RBP18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 DEPDC1BQ8WUY9 529 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 TBC1D31Q96DN5 1066 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 UBE2OQ9C0C9 1292 aaKnown RBP18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 SHROOM3Q8TF72 1996 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 C5orf60A6NFR6 353 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 E9PAM4 449 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 CHADO15335 359 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 CSPG5O95196 566 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 APRTP07741 180 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 SLC2A3P11169 496 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 ALDH1A3P47895 512 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 RAB33AQ14088 237 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 TRIP4Q15650 581 aaPredicted RBP18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 SKIDA1Q1XH10 827 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 MSS51Q4VC12 460 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 CAPN12Q6ZSI9 719 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 ANKMY2Q8IV38 441 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 ATP6V1G3Q96LB4 118 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 ETNK1Q9HBU6 452 aa18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 BCCIPQ9P287 314 aaKnown RBP eCLIP18.32■□□□□ 0.52
CHRNA4-206ENST00000498043 A0A0A0MRY4 1105 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 KCNK1O00180 336 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 TEX28O15482 410 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 STK10O94804 968 aaKnown RBP18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 HMGA1P17096 107 aaKnown RBP18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 SLCO1A2P46721 670 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 PLD1Q13393 1074 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 ANKRD20A2Q5SQ80 823 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 ANKRD20A1Q5TYW2 823 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 ANKRD20A3Q5VUR7 823 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 PSRC1Q6PGN9 363 aaPredicted RBP18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 C14orf80Q86SX3 495 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 CEP295NLQ96MC4 621 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 SPATA13Q96N96 652 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 ZBP1Q9H171 429 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 HSFX1Q9UBD0 423 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 INSL6Q9Y581 213 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 RAD54BQ9Y620 910 aa18.31■□□□□ 0.52
CHRNA4-206ENST00000498043 TLDC2A0PJX2 215 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 SMAPO00193 183 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 FGF10O15520 208 aaPredicted RBP18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 CSH1P0DML2 217 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 CSH2P0DML3 217 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 HOXC13P31276 330 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 TUBP50607 506 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 GALNT2Q10471 571 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 TWF1Q12792 350 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 DNAJC21Q5F1R6 531 aaKnown RBP18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 ARTNQ5T4W7 220 aa18.3■□□□□ 0.52
CHRNA4-206ENST00000498043 KLHL23Q8NBE8 558 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms