RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 PGAP3Q96FM1 320 aaPredicted RBP11.66□□□□□ -0.54
ERCC8-208ENST00000497892 BTN2A3PQ96KV6 586 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 PRICKLE1Q96MT3 831 aaPredicted RBP11.66□□□□□ -0.54
ERCC8-208ENST00000497892 DDX50Q9BQ39 737 aaKnown RBP11.66□□□□□ -0.54
ERCC8-208ENST00000497892 SLC2A11Q9BYW1 496 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 PIGVQ9NUD9 493 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 TMEM51Q9NW97 253 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 C2orf42Q9NWW7 574 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 XPO7Q9UIA9 1087 aaKnown RBP11.66□□□□□ -0.54
ERCC8-208ENST00000497892 SLC27A6Q9Y2P4 619 aa11.66□□□□□ -0.54
ERCC8-208ENST00000497892 LUC7L2Q9Y383 392 aaKnown RBP11.66□□□□□ -0.54
ERCC8-208ENST00000497892 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.66□□□□□ -0.54
ERCC8-208ENST00000497892 MUC22E2RYF6 1773 aaPredicted RBP11.65□□□□□ -0.54
ERCC8-208ENST00000497892 SYNJ2BP-COX16A0A087WUM0 186 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 GOLGA6L7A0A1B0GV03 622 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 TCRBV5S1A1TA0A578 114 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 TSPAN3O60637 253 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 F9P00740 461 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 CISD3P0C7P0 127 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 SP9P0CG40 484 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 SKILP12757 684 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 TDGF1P13385 188 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 CASP14P31944 242 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 TNFRSF4P43489 277 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 KIR2DL1P43626 348 aaPredicted RBP11.65□□□□□ -0.54
ERCC8-208ENST00000497892 CXCL12P48061 93 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 CXCR3P49682 368 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 SGSHP51688 502 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 MRPS21P82921 87 aaKnown RBP11.65□□□□□ -0.54
ERCC8-208ENST00000497892 NHLH1Q02575 133 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 MS4A13Q5J8X5 152 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 C10orf76Q5T2E6 689 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 PIK3R6Q5UE93 754 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 RFWD3Q6PCD5 774 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 MCOLN2Q8IZK6 566 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 EMC1Q8N766 993 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 ATP6V0D2Q8N8Y2 350 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 HJURPQ8NCD3 748 aaPredicted RBP11.65□□□□□ -0.54
ERCC8-208ENST00000497892 RPLP0P6Q8NHW5 317 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 USP33Q8TEY7 942 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 CPLX3Q8WVH0 158 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 NELL1Q92832 810 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 ACDQ96AP0 544 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 VCPIP1Q96JH7 1222 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 TBCBQ99426 244 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 TAS2R14Q9NYV8 317 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 COX16Q9P0S2 106 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 PAXBP1Q9Y5B6 917 aa11.65□□□□□ -0.54
ERCC8-208ENST00000497892 BZW2Q9Y6E2 419 aaKnown RBP11.65□□□□□ -0.54
ERCC8-208ENST00000497892 VPS13AQ96RL7 3174 aa11.65□□□□□ -0.55
ERCC8-208ENST00000497892 DMDP11532 3685 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 TBC1D3BA6NDS4 549 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 ANTXRLA6NF34 631 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 C2CD4BA6NLJ0 364 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 K7ESF4 209 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 DDX3XO00571 662 aaKnown RBP eCLIP11.64□□□□□ -0.552e-6■■□□□ 11.9
ERCC8-208ENST00000497892 AP5Z1O43299 807 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 GDF9O60383 454 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 GJB6O95452 261 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 SERPING1P05155 500 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 KRT3P12035 628 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 GZMAP12544 262 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 ABCB4P21439 1286 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 RRM1P23921 792 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 SDC4P31431 198 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 HNRNPH3P31942 346 aaKnown RBP11.64□□□□□ -0.55
ERCC8-208ENST00000497892 RDXP35241 583 aaKnown RBP11.64□□□□□ -0.55
ERCC8-208ENST00000497892 RFC1P35251 1148 aaPredicted RBP11.64□□□□□ -0.55
ERCC8-208ENST00000497892 PTPN9P43378 593 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 SEC13P55735 322 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 CSTF1Q05048 431 aaKnown RBP11.64□□□□□ -0.55
ERCC8-208ENST00000497892 DEUP1Q05D60 604 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 ARID5BQ14865 1188 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 HSF5Q4G112 596 aaPredicted RBP11.64□□□□□ -0.55
ERCC8-208ENST00000497892 C2orf27AQ580R0 203 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 TDRD12Q587J7 1177 aaKnown RBP11.64□□□□□ -0.55
ERCC8-208ENST00000497892 BRMS1LQ5PSV4 323 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 RAP1GAP2Q684P5 730 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 DNAJC24Q6P3W2 148 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 TSSK4Q6SA08 328 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 SYT13Q7L8C5 426 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 PHLDB2Q86SQ0 1253 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 JOSD2Q8TAC2 188 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 RXFP2Q8WXD0 754 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 RNF34Q969K3 372 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 TMA16Q96EY4 203 aaKnown RBP11.64□□□□□ -0.55
ERCC8-208ENST00000497892 MYEOVQ96EZ4 313 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 CFAP57Q96MR6 1250 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 DNAJC7Q99615 494 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 PRMT1Q99873 361 aaKnown RBP11.64□□□□□ -0.55
ERCC8-208ENST00000497892 FAM126AQ9BYI3 521 aaPredicted RBP11.64□□□□□ -0.55
ERCC8-208ENST00000497892 RBSNQ9H1K0 784 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 ARHGEF38Q9NXL2 777 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 SLC12A6Q9UHW9 1150 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 CLEC4EQ9ULY5 219 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 STARD13Q9Y3M8 1113 aa11.64□□□□□ -0.55
ERCC8-208ENST00000497892 MYO18AQ92614 2054 aaKnown RBP11.64□□□□□ -0.55
ERCC8-208ENST00000497892 TYW5A2RUC4 315 aaKnown RBP11.63□□□□□ -0.55
ERCC8-208ENST00000497892 SIGLEC16A6NMB1 481 aa11.63□□□□□ -0.55
ERCC8-208ENST00000497892 TMCO5BA8MYB1 307 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms