RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 PRDM16Q9HAZ2 1276 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 KCNK9Q9NPC2 374 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 PLCB1Q9NQ66 1216 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 LOC105369274A0A096LPK9 316 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 LOC102723532A0A0G2JNH3 316 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 C2CD4BA6NLJ0 364 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 KIF28PB7ZC32 967 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 NKX2-8O15522 239 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 TLR2O60603 784 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 USP12O75317 370 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 SKAP2O75563 359 aaPredicted RBP4.29□□□□□ -1.72
CD46-218ENST00000496723 OAZ2O95190 189 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 PEPDP12955 493 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 LINC00205P59089 165 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 PTK2BQ14289 1009 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 PUM3Q15397 648 aaKnown RBP4.29□□□□□ -1.72
CD46-218ENST00000496723 RBMS2Q15434 407 aaKnown RBP4.29□□□□□ -1.72
CD46-218ENST00000496723 WDR93Q6P2C0 686 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 DHRS13Q6UX07 377 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 IRF2BP2Q7Z5L9 587 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 UBE2Q1Q7Z7E8 422 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 ANKRD13BQ86YJ7 626 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 OR4N4Q8N0Y3 316 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 SRFBP1Q8NEF9 429 aaKnown RBP4.29□□□□□ -1.72
CD46-218ENST00000496723 VPS37AQ8NEZ2 397 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 REXO5Q96IC2 774 aaKnown RBP4.29□□□□□ -1.72
CD46-218ENST00000496723 MARK4Q96L34 752 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 CCDC134Q9H6E4 229 aa4.29□□□□□ -1.72
CD46-218ENST00000496723 SPATA31A5Q5VU36 1347 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 EMSYQ7Z589 1322 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 SPATA31A7Q8IWB4 1347 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 PRR23D1E9PI22 279 aaPredicted RBP4.28□□□□□ -1.72
CD46-218ENST00000496723 F5H423 210 aaPredicted RBP4.28□□□□□ -1.72
CD46-218ENST00000496723 KAT7O95251 611 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 RFPL3SP0C7P2 107 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 PRR23D2P0DMB1 279 aaPredicted RBP4.28□□□□□ -1.72
CD46-218ENST00000496723 GYS1P13807 737 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 AKR1A1P14550 325 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 PDIA3P30101 505 aaKnown RBP4.28□□□□□ -1.72
CD46-218ENST00000496723 SOX2P48431 317 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 RGS19P49795 217 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 SLC12A2P55011 1212 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 SLC37A1P57057 533 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 ICA1Q05084 483 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 GALNT1Q10472 559 aaPredicted RBP4.28□□□□□ -1.72
CD46-218ENST00000496723 BTBD16Q32M84 506 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 ANXA2RQ3ZCQ2 193 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 ZACNQ401N2 412 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 ZNF793Q6ZN11 406 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 DEF8Q6ZN54 512 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 FAM57BQ71RH2 274 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 MYLK4Q86YV6 388 aaPredicted RBP4.28□□□□□ -1.72
CD46-218ENST00000496723 RHPN2Q8IUC4 686 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 SAMD3Q8N6K7 520 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 NRACQ8N912 160 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 ATG16L2Q8NAA4 619 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 OR1N1Q8NGS0 311 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 BCAS4Q8TDM0 211 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 ADAMTS15Q8TE58 950 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 IGFBPL1Q8WX77 278 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 KAT2BQ92831 832 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 MECRQ9BV79 373 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 TAGLN3Q9UI15 199 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 RAB21Q9UL25 225 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 NFU1Q9UMS0 254 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 ZBTB1Q9Y2K1 713 aa4.28□□□□□ -1.72
CD46-218ENST00000496723 ZMYM2Q9UBW7 1377 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 LY6G6EA0A0G2JKS1 128 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 PPP6R2O75170 966 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 PRF1P14222 555 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 TFEBP19484 476 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 SCP2P22307 547 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 TAS2R50P59544 299 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 RPL15P61313 204 aaKnown RBP4.27□□□□□ -1.73
CD46-218ENST00000496723 RNASELQ05823 741 aaKnown RBP4.27□□□□□ -1.73
CD46-218ENST00000496723 ZNF569Q5MCW4 686 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 KIAA1161Q6NSJ0 714 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 SLC39A5Q6ZMH5 540 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.27□□□□□ -1.73
CD46-218ENST00000496723 ADGRF4Q8IZF3 695 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 SPICE1Q8N0Z3 855 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 WIPF2Q8TF74 440 aaPredicted RBP4.27□□□□□ -1.73
CD46-218ENST00000496723 POF1BQ8WVV4 589 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 ABHD14AQ9BUJ0 271 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 KATNAL1Q9BW62 490 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 MOV10Q9HCE1 1003 aaKnown RBP4.27□□□□□ -1.73
CD46-218ENST00000496723 TMEM45AQ9NWC5 275 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 LRFN1Q9P244 771 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 IPO11Q9UI26 975 aaKnown RBP4.27□□□□□ -1.73
CD46-218ENST00000496723 TRPC5Q9UL62 973 aaPredicted RBP4.27□□□□□ -1.73
CD46-218ENST00000496723 SLC12A4Q9UP95 1085 aa4.27□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3DA0A087WVF3 549 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3IA0A087WXS9 549 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3EA0A087X179 549 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3KA0A087X1G2 549 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3BA6NDS4 549 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3FA6NER0 549 aaPredicted RBP4.26□□□□□ -1.73
CD46-218ENST00000496723 TBC1D3LB9A6J9 549 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 SYT5O00445 386 aa4.26□□□□□ -1.73
CD46-218ENST00000496723 UGDHO60701 494 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms