RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 CBX8Q9HC52 389 aa7.87□□□□□ -1.15
CDHR3-214ENST00000496633 MRPL47Q9HD33 250 aaKnown RBP7.87□□□□□ -1.15
CDHR3-214ENST00000496633 ACP6Q9NPH0 428 aa7.87□□□□□ -1.15
CDHR3-214ENST00000496633 SEPT11Q9NVA2 429 aaKnown RBP7.87□□□□□ -1.15
CDHR3-214ENST00000496633 FAM86C1Q9NVL1 165 aa7.87□□□□□ -1.15
CDHR3-214ENST00000496633 AIPL1Q9NZN9 384 aa7.87□□□□□ -1.15
CDHR3-214ENST00000496633 ADAM22Q9P0K1 906 aa7.87□□□□□ -1.15
CDHR3-214ENST00000496633 BCCIPQ9P287 314 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDHR3-214ENST00000496633 CYTH4Q9UIA0 394 aa7.87□□□□□ -1.15
CDHR3-214ENST00000496633 LCMT1Q9UIC8 334 aa7.87□□□□□ -1.15
CDHR3-214ENST00000496633 TPX2Q9ULW0 747 aaKnown RBP7.87□□□□□ -1.15
CDHR3-214ENST00000496633 SCML1Q9UN30 329 aa7.87□□□□□ -1.15
CDHR3-214ENST00000496633 SMG5Q9UPR3 1016 aaKnown RBP7.87□□□□□ -1.15
CDHR3-214ENST00000496633 R4GN57 208 aa7.87□□□□□ -1.15
CDHR3-214ENST00000496633 ZFHX2Q9C0A1 2572 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 ITIH6Q6UXX5 1313 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 PRR5-ARHGAP8B1AHC4 643 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 H0Y626 953 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 SCAMP3O14828 347 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 MSI1O43347 362 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 TBL1XO60907 577 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 RNASEH1O60930 286 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 GABBR2O75899 941 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 SRPRAP08240 638 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 DLDP09622 509 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 PABPC1P11940 636 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 KRT3P12035 628 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 UNGP13051 313 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 TACR2P21452 398 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 HOXD9P28356 352 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 HTR7P34969 479 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 RDXP35241 583 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 HOXD12P35452 270 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 PTPN9P43378 593 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 FNTBP49356 437 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 CXCR3P49682 368 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 SULT1E1P49888 294 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 ZNF135P52742 658 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 SEC13P55735 322 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 ARHGAP8P85298 464 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 ZBED6P86452 979 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 FANCCQ00597 558 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 FMO1Q01740 532 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 LMNB2Q03252 620 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 CCDC15Q0P6D6 951 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 NME3Q13232 169 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 ENPP2Q13822 863 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 CLEC16AQ2KHT3 1053 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 FAM133BQ5BKY9 247 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 ZC3H12AQ5D1E8 599 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 TAF3Q5VWG9 929 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 SYPL2Q5VXT5 272 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 RNF43Q68DV7 783 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 TSSK4Q6SA08 328 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 SERPINA13PQ6UXR4 307 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 ZNF783Q6ZMS7 281 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 PRR23BQ6ZRT6 265 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 CHST9Q7L1S5 443 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 KIAA0907Q7Z7F0 614 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 C12orf40Q86WS4 652 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 DRC7Q8IY82 874 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 PGBD3Q8N328 593 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 SUMF1Q8NBK3 374 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 CPA5Q8WXQ8 436 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 PIWIL1Q96J94 861 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 RPRD1AQ96P16 312 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 CIPCQ9C0C6 399 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 TSPY26PQ9H489 355 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 PARVAQ9NVD7 372 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 ZNHIT6Q9NWK9 470 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 THAP10Q9P2Z0 257 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 AJAP1Q9UKB5 411 aaPredicted RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 LUC7L2Q9Y383 392 aaKnown RBP7.86□□□□□ -1.15
CDHR3-214ENST00000496633 SCINQ9Y6U3 715 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 MYO15AQ9UKN7 3530 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 VPS13AQ96RL7 3174 aa7.86□□□□□ -1.15
CDHR3-214ENST00000496633 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-214ENST00000496633 TCRBV21S2A2A0A5A6 115 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 SIGLEC16A6NMB1 481 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 MAP3K13O43283 966 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 AP5Z1O43299 807 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 ENDOD1O94919 500 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 MOCS2O96007 188 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-214ENST00000496633 ACADMP11310 421 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 PDGFRAP16234 1089 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 HOXC13P31276 330 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 PLK1P53350 603 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 CDH4P55283 916 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 GEMIN4P57678 1058 aaKnown RBP7.85□□□□□ -1.15
CDHR3-214ENST00000496633 RNASE9P60153 205 aaKnown RBP7.85□□□□□ -1.15
CDHR3-214ENST00000496633 KRT83P78385 493 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 NRG1Q02297 640 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-214ENST00000496633 KLHL30Q0D2K2 578 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 ZNF177Q13360 481 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-214ENST00000496633 ARID5BQ14865 1188 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 ACAP1Q15027 740 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 TTC31Q49AM3 519 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-214ENST00000496633 C5orf22Q49AR2 442 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 C6orf118Q5T5N4 469 aa7.85□□□□□ -1.15
CDHR3-214ENST00000496633 HEATR6Q6AI08 1181 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms