RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 RAD54BQ9Y620 910 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 HS3ST4Q9Y661 456 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 SMAPO00193 183 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 PPP1R12AO14974 1030 aaPredicted RBP16.87■□□□□ 0.29
HLA-A-208ENST00000496081 ACSL3O95573 720 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 SLC2A3P11169 496 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 HMGA1P17096 107 aaKnown RBP16.87■□□□□ 0.29
HLA-A-208ENST00000496081 HOXC13P31276 330 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 MAGEA4P43358 317 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 GYS2P54840 703 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 MLLT6P55198 1093 aaPredicted RBP16.87■□□□□ 0.29
HLA-A-208ENST00000496081 IFFO1Q0D2I5 559 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 AP1B1Q10567 949 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 KCNJ11Q14654 390 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 TRIP4Q15650 581 aaPredicted RBP16.87■□□□□ 0.29
HLA-A-208ENST00000496081 RWDD4Q6NW29 188 aaKnown RBP16.87■□□□□ 0.29
HLA-A-208ENST00000496081 MIB1Q86YT6 1006 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 CCNYQ8ND76 341 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 P2RY11Q96G91 374 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 ZBED2Q9BTP6 218 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 SAYSD1Q9NPB0 183 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 YIPF1Q9Y548 306 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 INSL6Q9Y581 213 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 TLR5O60602 858 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 LILRB3O75022 631 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 MYZAPP0CAP1 466 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 HTR7P34969 479 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 NRG1Q02297 640 aaPredicted RBP16.87■□□□□ 0.29
HLA-A-208ENST00000496081 HIF1AQ16665 826 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 C4orf22Q6V702 233 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 CENPUQ71F23 418 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 GPR65Q8IYL9 337 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 C7orf61Q8IZ16 206 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 CLP1Q92989 425 aaKnown RBP16.87■□□□□ 0.29
HLA-A-208ENST00000496081 C1orf74Q96LT6 269 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 C9orf72Q96LT7 481 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 KLC2Q9H0B6 622 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 FNIP2Q9P278 1114 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 NUP205Q92621 2012 aa16.87■□□□□ 0.29
HLA-A-208ENST00000496081 GOLGA6L10A6NI86 522 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 ALOX15BO15296 676 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 CHADO15335 359 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 NCAM2O15394 837 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 TEX28O15482 410 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 METTL18O95568 372 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 CSH1P0DML2 217 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 CSH2P0DML3 217 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 SERPINB6P35237 376 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 ALDH1A3P47895 512 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 FASTKD3Q14CZ7 662 aaKnown RBP16.86■□□□□ 0.29
HLA-A-208ENST00000496081 FNBP1LQ5T0N5 605 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 PIK3R6Q5UE93 754 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 SNX30Q5VWJ9 437 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 PSRC1Q6PGN9 363 aaPredicted RBP16.86■□□□□ 0.29
HLA-A-208ENST00000496081 C14orf80Q86SX3 495 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 ZNF276Q8N554 614 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 OVCA2Q8WZ82 227 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 TBC1D31Q96DN5 1066 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 ZBP1Q9H171 429 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 ETNK1Q9HBU6 452 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.86■□□□□ 0.29
HLA-A-208ENST00000496081 STK39Q9UEW8 545 aa16.86■□□□□ 0.29
HLA-A-208ENST00000496081 A0A0A0MRY4 1105 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 SLC12A8A0AV02 714 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 GOLGA6CA6NDK9 693 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 E9PAM4 449 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 FGF10O15520 208 aaPredicted RBP16.85■□□□□ 0.29
HLA-A-208ENST00000496081 IGLV3-27P01718 113 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 APOEP02649 317 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 GOLGA6DP0CG33 693 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 MAGEA6P43360 314 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 ARL4CP56559 192 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 GALNT2Q10471 571 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 WASHC5Q12768 1159 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 PDIA2Q13087 525 aaKnown RBP16.85■□□□□ 0.29
HLA-A-208ENST00000496081 KRT71Q3SY84 523 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 ANKRD20A2Q5SQ80 823 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 SYCP2LQ5T4T6 812 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 FAXCQ5TGI0 409 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 ANKRD20A1Q5TYW2 823 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 ANKRD20A3Q5VUR7 823 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 KCTD16Q68DU8 428 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 KLHL23Q8NBE8 558 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 PDZD8Q8NEN9 1154 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 DPF3Q92784 378 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 ATP6V1G3Q96LB4 118 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 MYRFLQ96LU7 910 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 ZNF512Q96ME7 567 aaPredicted RBP16.85■□□□□ 0.29
HLA-A-208ENST00000496081 SPATA13Q96N96 652 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 HTATIP2Q9BUP3 242 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 PHACTR1Q9C0D0 580 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 RXFP1Q9HBX9 757 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 GOLGA6AQ9NYA3 693 aa16.85■□□□□ 0.29
HLA-A-208ENST00000496081 ZNF840PA6NDX5 716 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 RNF103O00237 685 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 CTSAP10619 480 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 SYN1P17600 705 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 TUBP50607 506 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 PPIDQ08752 370 aaKnown RBP16.84■□□□□ 0.29
HLA-A-208ENST00000496081 MSS51Q4VC12 460 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms