RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	RFWD3	Q6PCD5	774 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	MMS22L	Q6ZRQ5	1243 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	ALYREF	Q86V81	257 aa	Known RBP	12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	CCDC33	Q8N5R6	958 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	TXNDC5	Q8NBS9	432 aa	Known RBP	12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	HJURP	Q8NCD3	748 aa	Predicted RBP	12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	TSTD1	Q8NFU3	115 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	SLC30A5	Q8TAD4	765 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	RNF34	Q969K3	372 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	PCDHB18P	Q96TA0	734 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	TTYH3	Q9C0H2	523 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	ADAM22	Q9P0K1	906 aa		12.82	□□□□□ -0.36
MRPL55-233	ENST00000495899	CACNA1I	Q9P0X4	2223 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	PRR23A	A6NEV1	266 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	SGK1	O00141	431 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	GFRA3	O60609	400 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	TBL1X	O60907	577 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	ALDH1A2	O94788	518 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	MOCS2	O96007	188 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	CALB1	P05937	261 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	PRKCI	P41743	596 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	CXCR3	P49682	368 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	GSC	P56915	257 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	DMWD	Q09019	674 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	PTP4A2	Q12974	167 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	NME3	Q13232	169 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	C2CD6	Q53TS8	623 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	BRMS1L	Q5PSV4	323 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	HEATR6	Q6AI08	1181 aa	Known RBP	12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	ANKS1B	Q7Z6G8	1248 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	RASSF3	Q86WH2	238 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	SUMF1	Q8NBK3	374 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	FIBIN	Q8TAL6	211 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	WFIKKN2	Q8TEU8	576 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	UCMA	Q8WVF2	138 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	SYN2	Q92777	582 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	VCPIP1	Q96JH7	1222 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	SYT11	Q9BT88	431 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	WDCP	Q9H6R7	721 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	POLM	Q9NP87	494 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	ELOVL2	Q9NXB9	296 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	IFNK	Q9P0W0	207 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	HCN2	Q9UL51	889 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	CLEC4E	Q9ULY5	219 aa		12.81	□□□□□ -0.36
MRPL55-233	ENST00000495899	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	ANTXRL	A6NF34	631 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899		F5H5T6	163 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	GOLGA8S	H3BPF8	625 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	AXIN1	O15169	862 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	HR	O43593	1189 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	ADAM23	O75077	832 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	ENDOD1	O94919	500 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	TACR2	P21452	398 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	TNFAIP3	P21580	790 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	HLA-F	P30511	346 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	FLT3	P36888	993 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	DEUP1	Q05D60	604 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	ENPP2	Q13822	863 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	ASIC2	Q16515	512 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	GEN1	Q17RS7	908 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	ACAD10	Q6JQN1	1059 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	ADGRD1	Q6QNK2	874 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	ASCL5	Q7RTU5	278 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	BNIPL	Q7Z465	357 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	CHPF	Q8IZ52	775 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	AHI1	Q8N157	1196 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	GAB3	Q8WWW8	586 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	PRICKLE1	Q96MT3	831 aa	Predicted RBP	12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	HHIP	Q96QV1	700 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	PRMT1	Q99873	361 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	GABRG3	Q99928	467 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	C11orf70	Q9BRQ4	267 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	PIGV	Q9NUD9	493 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	SEPT11	Q9NVA2	429 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	POLR3B	Q9NW08	1133 aa	Predicted RBP	12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	ARHGEF38	Q9NXL2	777 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	COX16	Q9P0S2	106 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	THAP10	Q9P2Z0	257 aa	Predicted RBP	12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	XPO7	Q9UIA9	1087 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	CAPN11	Q9UMQ6	739 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	BZW2	Q9Y6E2	419 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	VPS13A	Q96RL7	3174 aa		12.8	□□□□□ -0.36
MRPL55-233	ENST00000495899	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	SIGLEC16	A6NMB1	481 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	ZBTB24	O43167	697 aa	Predicted RBP	12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	CBFA2T2	O43439	604 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	PABPC1	P11940	636 aa	Known RBP	12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	KRT3	P12035	628 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	GZMA	P12544	262 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	PXN	P49023	591 aa	Predicted RBP	12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	SULT1E1	P49888	294 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	SGSH	P51688	502 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	RPS24	P62847	133 aa	Known RBP	12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	KLHL30	Q0D2K2	578 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	RABGAP1L	Q5R372	815 aa		12.79	□□□□□ -0.36

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