RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ZNF318Q5VUA4 2279 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 TTC3P53804 2025 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 TBKBP1A7MCY6 615 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 B5MCH6 92 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 M0QZ92 97 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 MGEA5O60502 916 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 POU2F2P09086 479 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 SCG2P13521 617 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 RXRAP19793 462 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 PSMA5P28066 241 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 KIF5BP33176 963 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 MAN2A2P49641 1150 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 CDC42EP1Q00587 391 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 KRT32Q14532 448 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 PLCB4Q15147 1175 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 CDSNQ15517 529 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 CSRP2Q16527 193 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 NFE2Q16621 373 aaPredicted RBP7.17□□□□□ -1.26
VIM-207ENST00000495528 TMEM266Q2M3C6 531 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 FAM102BQ5T8I3 360 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 PPP4R3AQ6IN85 833 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 MTHFD1LQ6UB35 978 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 DOK3Q7L591 496 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 DRC7Q8IY82 874 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 CHPFQ8IZ52 775 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 VN1R2Q8NFZ6 395 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 CYP2W1Q8TAV3 490 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 ATP8B4Q8TF62 1192 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 MNTQ99583 582 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 LZTS2Q9BRK4 669 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 PHF7Q9BWX1 381 aaPredicted RBP7.17□□□□□ -1.26
VIM-207ENST00000495528 AZI2Q9H6S1 392 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 TLE6Q9H808 572 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 SLC9A2Q9UBY0 812 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 SEC63Q9UGP8 760 aaKnown RBP7.17□□□□□ -1.26
VIM-207ENST00000495528 PCDHB7Q9Y5E2 793 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 CYP46A1Q9Y6A2 500 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 IGSF9BQ9UPX0 1349 aa7.17□□□□□ -1.26
VIM-207ENST00000495528 NLRC5Q86WI3 1866 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 SMIM35A0A1B0GVV1 85 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 PRRG2O14669 202 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 PRC1O43663 620 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 DTNBO60941 627 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 RPLP2P05387 115 aaKnown RBP7.16□□□□□ -1.26
VIM-207ENST00000495528 ARP10275 920 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 KLRC1P26715 233 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 BUD31P41223 144 aaPredicted RBP7.16□□□□□ -1.26
VIM-207ENST00000495528 GNAQP50148 359 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 VCPP55072 806 aaKnown RBP7.16□□□□□ -1.26
VIM-207ENST00000495528 CLRN1P58418 232 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 ACTR2P61160 394 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 MTM1Q13496 603 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 DUSP6Q16828 381 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 BMT2Q1RMZ1 405 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 USP39Q53GS9 565 aaKnown RBP7.16□□□□□ -1.26
VIM-207ENST00000495528 SPOUT1Q5T280 376 aaKnown RBP7.16□□□□□ -1.26
VIM-207ENST00000495528 C1QL3Q5VWW1 255 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 EFCAB12Q6NXP0 572 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 BLOC1S2Q6QNY1 142 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 USP45Q70EL2 814 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 RUFY3Q7L099 469 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 PLPPR4Q7Z2D5 763 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 RAB11FIP4Q86YS3 637 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 SUGP1Q8IWZ8 645 aaKnown RBP7.16□□□□□ -1.26
VIM-207ENST00000495528 GRAMD1CQ8IYS0 662 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 NME8Q8N427 588 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 OR52N2Q8NGI0 321 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 SUSD6Q92537 303 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 EXTL1Q92935 676 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 SNX27Q96L92 541 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 TCEANC2Q96MN5 208 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 CDK5RAP1Q96SZ6 601 aaKnown RBP7.16□□□□□ -1.26
VIM-207ENST00000495528 MXRA8Q9BRK3 442 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 LRRC2Q9BYS8 371 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 TM6SF1Q9BZW5 370 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 S1PR5Q9H228 398 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 ERVK-5Q9HDB9 667 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 PDRG1Q9NUG6 133 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.16□□□□□ -1.26
VIM-207ENST00000495528 GINS2Q9Y248 185 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 KDM3AQ9Y4C1 1321 aa7.16□□□□□ -1.26
VIM-207ENST00000495528 RALGAPA2Q2PPJ7 1873 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 DOCK5Q9H7D0 1870 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 IGKV6D-21A0A0A0MT36 114 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 LRRC14BA6NHZ5 514 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 CCDC69A6NI79 296 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 SH2B2O14492 632 aaPredicted RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 PRPF3O43395 683 aaKnown RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 AP1G1O43747 822 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 RPS6KA5O75582 802 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 FGF18O76093 207 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 HMGB1P09429 215 aaKnown RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 ATF7P17544 494 aaPredicted RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 RPS6KB1P23443 525 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 ACRV1P26436 265 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 AVPR2P30518 371 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 MCM5P33992 734 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 DSC2Q02487 901 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 UBE3AQ05086 875 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 SIGLEC14Q08ET2 396 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms