RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 DOCK4Q8N1I0 1966 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 E9PAM4 449 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 H3BRJ5 948 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 TRDMT1O14717 391 aaKnown RBP16.2■□□□□ 0.18
PHF1-211ENST00000495509 DAPK3O43293 454 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 ACSL4O60488 711 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 PRAMEF12O95522 483 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 DDX6P26196 483 aaKnown RBP eCLIP16.2■□□□□ 0.187e-7■□□□□ 9.7
PHF1-211ENST00000495509 EPHB2P29323 1055 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 SLC6A4P31645 630 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 AVPR1AP37288 418 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 IRAK1P51617 712 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 TPI1P60174 286 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 MRPS25P82663 173 aaKnown RBP16.2■□□□□ 0.18
PHF1-211ENST00000495509 FAM133BQ5BKY9 247 aaKnown RBP16.2■□□□□ 0.18
PHF1-211ENST00000495509 MANEALQ5VSG8 457 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 RFWD3Q6PCD5 774 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 VSIG1Q86XK7 387 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 KLHL7Q8IXQ5 586 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 ZNF683Q8IZ20 524 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 MNS1Q8NEH6 495 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 USP13Q92995 863 aaPredicted RBP16.2■□□□□ 0.18
PHF1-211ENST00000495509 EPAS1Q99814 870 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 MPP6Q9NZW5 540 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 CFAP97Q9P2B7 532 aa16.2■□□□□ 0.18
PHF1-211ENST00000495509 HELZP42694 1942 aaKnown RBP16.2■□□□□ 0.18
PHF1-211ENST00000495509 ZNF487B1APH4 448 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 LEFTY2O00292 366 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 MAP3K6O95382 1288 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 PECAM1P16284 738 aaPredicted RBP16.19■□□□□ 0.18
PHF1-211ENST00000495509 HOXB8P17481 243 aaPredicted RBP16.19■□□□□ 0.18
PHF1-211ENST00000495509 PFKLP17858 780 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 ERCC2P18074 760 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 FSHRP23945 695 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 HCAR3P49019 387 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 SLC10A2Q12908 348 aaPredicted RBP16.19■□□□□ 0.18
PHF1-211ENST00000495509 SNX1Q13596 522 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 SLC9A4Q6AI14 798 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 RWDD4Q6NW29 188 aaKnown RBP16.19■□□□□ 0.18
PHF1-211ENST00000495509 FBXL22Q6P050 247 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 ARID3BQ8IVW6 561 aaPredicted RBP16.19■□□□□ 0.18
PHF1-211ENST00000495509 CCDC33Q8N5R6 958 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 ST13P5Q8NFI4 369 aaPredicted RBP16.19■□□□□ 0.18
PHF1-211ENST00000495509 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.19■□□□□ 0.18
PHF1-211ENST00000495509 SH3RF2Q8TEC5 729 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 IGSF8Q969P0 613 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 DDX47Q9H0S4 455 aaKnown RBP16.19■□□□□ 0.18
PHF1-211ENST00000495509 ADAM7Q9H2U9 754 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 RCOR3Q9P2K3 495 aaPredicted RBP16.19■□□□□ 0.18
PHF1-211ENST00000495509 ARHGAP26Q9UNA1 814 aa16.19■□□□□ 0.18
PHF1-211ENST00000495509 PRUNE2Q8WUY3 3088 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 APOL1O14791 398 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 TACR2P21452 398 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 SLC11A2P49281 568 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 TFDP2Q14188 446 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 CLUL1Q15846 466 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 NCBP2-AS2Q69YL0 99 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 TTC27Q6P3X3 843 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 Q6ZNB5 142 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 B4GALNT4Q76KP1 1039 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 CHSY1Q86X52 802 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 TP53INP2Q8IXH6 220 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 LRRN4Q8WUT4 740 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 KRT12Q99456 494 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 GAS2L1Q99501 681 aaPredicted RBP16.18■□□□□ 0.18
PHF1-211ENST00000495509 TDP1Q9NUW8 608 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 HEY1Q9Y5J3 304 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 DOCK8Q8NF50 2099 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 MYOFQ9NZM1 2061 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 DCLK1O15075 740 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 TSPAN3O60637 253 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 CNTN5O94779 1100 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 KCNJ1P48048 391 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 OTUD4Q01804 1114 aaKnown RBP16.18■□□□□ 0.18
PHF1-211ENST00000495509 NRG1Q02297 640 aaPredicted RBP16.18■□□□□ 0.18
PHF1-211ENST00000495509 GBE1Q04446 702 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 COL19A1Q14993 1142 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 CCDC85BQ15834 202 aaPredicted RBP16.18■□□□□ 0.18
PHF1-211ENST00000495509 ADGRF1Q5T601 910 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 HTR3DQ70Z44 454 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 GET4Q7L5D6 327 aaPredicted RBP16.18■□□□□ 0.18
PHF1-211ENST00000495509 CIR1Q86X95 450 aaPredicted RBP16.18■□□□□ 0.18
PHF1-211ENST00000495509 NPAS3Q8IXF0 933 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 LGI2Q8N0V4 545 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 CFAP52Q8N1V2 620 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 ZSCAN18Q8TBC5 510 aaPredicted RBP16.18■□□□□ 0.18
PHF1-211ENST00000495509 ACTL9Q8TC94 416 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 MYLIPQ8WY64 445 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 FGF13Q92913 245 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 AZIN2Q96A70 460 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 MAGOHBQ96A72 148 aaKnown RBP16.18■□□□□ 0.18
PHF1-211ENST00000495509 MSLNLQ96KJ4 702 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 DCLK3Q9C098 648 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 C10orf88Q9H8K7 445 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 NDFIP2Q9NV92 336 aa16.18■□□□□ 0.18
PHF1-211ENST00000495509 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.18■□□□□ 0.18
PHF1-211ENST00000495509 V9GYY5 206 aaPredicted RBP16.18■□□□□ 0.18
PHF1-211ENST00000495509 SOBPA7XYQ1 873 aa16.17■□□□□ 0.18
PHF1-211ENST00000495509 SGSHP51688 502 aa16.17■□□□□ 0.18
PHF1-211ENST00000495509 ITIH3Q06033 890 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms