RNA–Protein interactions for RNA: ENST00000495040.1

PLXNA3-208, Transcript of plexin A3, human

TSL 5

Gene PLXNA3, Length 421 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLXNA3-208	ENST00000495040	CAMK2G	Q13555	558 aa	Predicted RBP	27.62	■■■□□ 2.01
PLXNA3-208	ENST00000495040	MS4A13	Q5J8X5	152 aa		27.62	■■■□□ 2.01
PLXNA3-208	ENST00000495040	MIIP	Q5JXC2	388 aa		27.62	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CCDC117	Q8IWD4	279 aa	Predicted RBP	27.62	■■■□□ 2.01
PLXNA3-208	ENST00000495040	TOE1	Q96GM8	510 aa	Known RBP	27.62	■■■□□ 2.01
PLXNA3-208	ENST00000495040	PPP1R13B	Q96KQ4	1090 aa		27.62	■■■□□ 2.01
PLXNA3-208	ENST00000495040	NUCKS1	Q9H1E3	243 aa	Known RBP	27.62	■■■□□ 2.01
PLXNA3-208	ENST00000495040	MUC22	E2RYF6	1773 aa	Predicted RBP	27.62	■■■□□ 2.01
PLXNA3-208	ENST00000495040	IGLV3-25	P01717	112 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	KRT9	P35527	623 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	TPMT	P51580	245 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	SNX16	P57768	344 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	RPS24	P62847	133 aa	Known RBP	27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	GFPT1	Q06210	699 aa	Predicted RBP	27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	PTPRN	Q16849	979 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	EFHC1	Q5JVL4	640 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	WDR45B	Q5MNZ6	344 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	PASD1	Q8IV76	773 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	RGL4	Q8IZJ4	473 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CPXM1	Q96SM3	734 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	FBRS	Q9HAH7	460 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	ASNSD1	Q9NWL6	643 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	TJP2	Q9UDY2	1190 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	SUSD2	Q9UGT4	822 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	AJAP1	Q9UKB5	411 aa	Predicted RBP	27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	TPR	P12270	2363 aa	Known RBP	27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	ADAMTS9	Q9P2N4	1935 aa		27.61	■■■□□ 2.01
PLXNA3-208	ENST00000495040	KCNJ18	B7U540	433 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	FOXN3	O00409	490 aa	Predicted RBP	27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	IGLV3-19	P01714	112 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	BPIFB4	P59827	614 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	TAF5	Q15542	800 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	UAP1L1	Q3KQV9	507 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	HSP90AA4P	Q58FG1	418 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	DCAF6	Q58WW2	860 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	ZC3H12A	Q5D1E8	599 aa	Known RBP	27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	PSAPL1	Q6NUJ1	521 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CADM4	Q8NFZ8	388 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	LMLN	Q96KR4	655 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	BTN2A3P	Q96KV6	586 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CAPN10	Q9HC96	672 aa		27.6	■■■□□ 2.01
PLXNA3-208	ENST00000495040	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	27.6	■■■□□ 2.01	2e-6	■■■■□ 23.8
PLXNA3-208	ENST00000495040	HSF2BP	O75031	334 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CLCN1	P35523	988 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	MAPK8	P45983	427 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	NOVA1	P51513	510 aa	Known RBP	27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	ATXN3	P54252	364 aa	Predicted RBP	27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CDK17	Q00537	523 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	EIF4EBP2	Q13542	120 aa	Predicted RBP	27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CDH18	Q13634	790 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	SLC47A2	Q86VL8	602 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CARNMT1	Q8N4J0	409 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	ATP6V0D2	Q8N8Y2	350 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	TTC17	Q96AE7	1141 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	MYEOV	Q96EZ4	313 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	SLC2A13	Q96QE2	648 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	NUP58	Q9BVL2	599 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	GPR174	Q9BXC1	333 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	LMBRD1	Q9NUN5	540 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	SUN2	Q9UH99	717 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	SLC12A6	Q9UHW9	1150 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	XPO7	Q9UIA9	1087 aa	Known RBP	27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	NFE2L3	Q9Y4A8	694 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CEP83	Q9Y592	693 aa		27.59	■■■□□ 2.01
PLXNA3-208	ENST00000495040	C7	P10643	843 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	SLC2A3	P11169	496 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	GNS	P15586	552 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CSRP1	P21291	193 aa	Known RBP	27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	KCNJ12	Q14500	433 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	C11orf57	Q6ZUT1	292 aa	Predicted RBP	27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CACUL1	Q86Y37	369 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	FAM71A	Q8IYT1	594 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	LGI2	Q8N0V4	545 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	DEFB106A	Q8N104	65 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CFAP52	Q8N1V2	620 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	ZNF366	Q8N895	744 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	C1orf131	Q8NDD1	294 aa	Known RBP	27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	FAM204A	Q9H8W3	233 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	SAMSN1	Q9NSI8	373 aa	Known RBP	27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	CACNA1E	Q15878	2313 aa		27.58	■■■□□ 2.01
PLXNA3-208	ENST00000495040	PCDH15	Q96QU1	1955 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	MEI4	A8MW99	385 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	PES1	O00541	588 aa	Known RBP	27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	LUC7L3	O95232	432 aa	Known RBP	27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	ASL	P04424	464 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	TACR2	P21452	398 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	PITX1	P78337	314 aa	Predicted RBP	27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	SH3PXD2A	Q5TCZ1	1133 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	RAP1GAP2	Q684P5	730 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	OR6B2	Q6IFH4	312 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	DPY19L2P1	Q6NXN4	242 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	CHSY1	Q86X52	802 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	DNASE2B	Q8WZ79	361 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	GTPBP2	Q9BX10	602 aa	Known RBP	27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	PRSS16	Q9NQE7	514 aa		27.57	■■■□□ 2
PLXNA3-208	ENST00000495040	KCNU1	A8MYU2	1149 aa		27.56	■■■□□ 2
PLXNA3-208	ENST00000495040		H0Y626	953 aa		27.56	■■■□□ 2
PLXNA3-208	ENST00000495040	SYP	P08247	313 aa		27.56	■■■□□ 2
PLXNA3-208	ENST00000495040	PNMA6A	P0CW24	399 aa	Predicted RBP	27.56	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms