RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 ARHGEF4Q9NR80 690 aa12.51□□□□□ -0.41
BRD3-206ENST00000494743 SMPD4Q9NXE4 827 aa12.51□□□□□ -0.41
BRD3-206ENST00000494743 OR12D3Q9UGF7 316 aa12.51□□□□□ -0.41
BRD3-206ENST00000494743 CDH22Q9UJ99 828 aa12.51□□□□□ -0.41
BRD3-206ENST00000494743 STOML2Q9UJZ1 356 aa12.51□□□□□ -0.41
BRD3-206ENST00000494743 MRPS23Q9Y3D9 190 aaKnown RBP12.51□□□□□ -0.41
BRD3-206ENST00000494743 NR2E1Q9Y466 385 aa12.51□□□□□ -0.41
BRD3-206ENST00000494743 IGLV3-10A0A075B6K4 115 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 H3BRJ5 948 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 EEF2KO00418 725 aaKnown RBP12.5□□□□□ -0.41
BRD3-206ENST00000494743 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
BRD3-206ENST00000494743 LRIG2O94898 1065 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 TJP3O95049 919 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 CORO1AP31146 461 aaKnown RBP12.5□□□□□ -0.41
BRD3-206ENST00000494743 HARS2P49590 506 aaKnown RBP12.5□□□□□ -0.41
BRD3-206ENST00000494743 FAM133BQ5BKY9 247 aaKnown RBP12.5□□□□□ -0.41
BRD3-206ENST00000494743 KAZNQ674X7 775 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 RFX8Q6ZV50 586 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 C14orf80Q86SX3 495 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 PLD5Q8N7P1 536 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 CEP112Q8N8E3 955 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 PRELID2Q8N945 189 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 LRRN4CLQ8ND94 238 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 PABPC5Q96DU9 382 aaKnown RBP12.5□□□□□ -0.41
BRD3-206ENST00000494743 ZSWIM3Q96MP5 696 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 EPAS1Q99814 870 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 APOL5Q9BWW9 433 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 SLC12A6Q9UHW9 1150 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 AGO1Q9UL18 857 aaKnown RBP12.5□□□□□ -0.41
BRD3-206ENST00000494743 R3HDM2Q9Y2K5 976 aaKnown RBP12.5□□□□□ -0.41
BRD3-206ENST00000494743 OBSL1O75147 1896 aa12.5□□□□□ -0.41
BRD3-206ENST00000494743 E9PAM4 449 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 GFRA2O00451 464 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 DCLK1O15075 740 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 CREB3O43889 395 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 ACSL4O60488 711 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 CST8O60676 142 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 PRAMEF12O95522 483 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 IRF1P10914 325 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 TCF3P15923 654 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 FSHRP23945 695 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 AVPR1AP37288 418 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 ARL4AP40617 200 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 SLC11A2P49281 568 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 TPI1P60174 286 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 AUHQ13825 339 aaKnown RBP12.49□□□□□ -0.41
BRD3-206ENST00000494743 TFDP2Q14188 446 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 SKIV2LQ15477 1246 aaKnown RBP12.49□□□□□ -0.41
BRD3-206ENST00000494743 CYP1B1Q16678 543 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 C5orf22Q49AR2 442 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 RAP1GAP2Q684P5 730 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 NCBP2-AS2Q69YL0 99 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 ADAT2Q7Z6V5 191 aaKnown RBP12.49□□□□□ -0.41
BRD3-206ENST00000494743 RFX6Q8HWS3 928 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 NPAS3Q8IXF0 933 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 FAM217AQ8IXS0 508 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 C12orf50Q8NA57 414 aaPredicted RBP12.49□□□□□ -0.41
BRD3-206ENST00000494743 MNS1Q8NEH6 495 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 RIN3Q8TB24 985 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 ING5Q8WYH8 240 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 USP13Q92995 863 aaPredicted RBP12.49□□□□□ -0.41
BRD3-206ENST00000494743 RPGRIP1Q96KN7 1286 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 AP1M1Q9BXS5 423 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 SIK2Q9H0K1 926 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 SMG9Q9H0W8 520 aaKnown RBP12.49□□□□□ -0.41
BRD3-206ENST00000494743 PRDM16Q9HAZ2 1276 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 RBM12Q9NTZ6 932 aaKnown RBP12.49□□□□□ -0.41
BRD3-206ENST00000494743 ETNK2Q9NVF9 386 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 CLDND1Q9NY35 253 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 CCL26Q9Y258 94 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 NOTCH4Q99466 2003 aa12.49□□□□□ -0.41
BRD3-206ENST00000494743 GOLGA6L7A0A1B0GV03 622 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 CTAGE15A4D2H0 777 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 DRGXA6NNA5 263 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 PRR33A8MZF0 331 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 LEFTY2O00292 366 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 KRIT1O00522 736 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 SLU7O95391 586 aaKnown RBP12.48□□□□□ -0.41
BRD3-206ENST00000494743 CTAGE8P0CG41 777 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 SLC6A4P31645 630 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 DYNLT1P63172 113 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 USP4Q13107 963 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 CBX2Q14781 532 aaPredicted RBP12.48□□□□□ -0.41
BRD3-206ENST00000494743 ZNF77Q15935 545 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 ADGRF1Q5T601 910 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 FBXL22Q6P050 247 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 HTR3DQ70Z44 454 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 CTAGE6Q86UF2 777 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 NLRP14Q86W24 1093 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 CHSY1Q86X52 802 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 DDX42Q86XP3 938 aaKnown RBP eCLIP12.48□□□□□ -0.41
BRD3-206ENST00000494743 DENND1CQ8IV53 801 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 CTAGE4Q8IX94 777 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 SH3RF2Q8TEC5 729 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 MAIP1Q8WWC4 291 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 TBC1D31Q96DN5 1066 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 MYEOVQ96EZ4 313 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 PRICKLE1Q96MT3 831 aaPredicted RBP12.48□□□□□ -0.41
BRD3-206ENST00000494743 DCLK3Q9C098 648 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 SLITRK6Q9H5Y7 841 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms