RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 FCHO1O14526 889 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 DNAJC6O75061 913 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 AP1G2O75843 785 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 WFS1O76024 890 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 FYNP06241 537 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 BPGMP07738 259 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 USP17L7P0C7H9 530 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 ESRRAP11474 423 aaPredicted RBP11.52□□□□□ -0.56
CHMP3-209ENST00000494623 MLNP12872 115 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 GM2AP17900 193 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 LRPAP1P30533 357 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 MLH1P40692 756 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 GLUD2P49448 558 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 MORN1Q5T089 497 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 PSTKQ8IV42 348 aaKnown RBP11.52□□□□□ -0.56
CHMP3-209ENST00000494623 C2orf69Q8N8R5 385 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 PPP1R14CQ8TAE6 165 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 KCTD13Q8WZ19 329 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 CDKL2Q92772 493 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 PTCD3Q96EY7 689 aaKnown RBP11.52□□□□□ -0.56
CHMP3-209ENST00000494623 BTBD10Q9BSF8 475 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 DENND2DQ9H6A0 471 aaPredicted RBP11.52□□□□□ -0.56
CHMP3-209ENST00000494623 CRTAC1Q9NQ79 661 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 XPNPEP3Q9NQH7 507 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 ANLNQ9NQW6 1124 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 SYBUQ9NX95 663 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 SIRPGQ9P1W8 387 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 MAGED2Q9UNF1 606 aaPredicted RBP11.52□□□□□ -0.56
CHMP3-209ENST00000494623 PSAT1Q9Y617 370 aa11.52□□□□□ -0.56
CHMP3-209ENST00000494623 RALGAPA2Q2PPJ7 1873 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 PPP1R12AO14974 1030 aaPredicted RBP11.52□□□□□ -0.57
CHMP3-209ENST00000494623 GYG2O15488 501 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 USP12O75317 370 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 ENTPD5O75356 428 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 ALDH1A2O94788 518 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 CELF2O95319 508 aaKnown RBP11.52□□□□□ -0.57
CHMP3-209ENST00000494623 ERVK-10P10266 1014 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 NCAM1P13591 858 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 ERCC2P18074 760 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 ADRA1BP35368 520 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 AQP5P55064 265 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 PDE1BQ01064 536 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 TLDC1Q6P9B6 456 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 RFWD3Q6PCD5 774 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 PACS1Q6VY07 963 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 RINLQ6ZS11 566 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 CRLF3Q8IUI8 442 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 FBXO41Q8TF61 875 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 LPPQ93052 612 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 C7orf26Q96N11 449 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 PPP1R10Q96QC0 940 aaKnown RBP11.52□□□□□ -0.57
CHMP3-209ENST00000494623 NUDCD1Q96RS6 583 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 TSPAN18Q96SJ8 248 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 GAD1Q99259 594 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 NMUR2Q9GZQ4 415 aa11.52□□□□□ -0.57
CHMP3-209ENST00000494623 KLHL8Q9P2G9 620 aaPredicted RBP11.52□□□□□ -0.57
CHMP3-209ENST00000494623 GABRDO14764 452 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 TPP1O14773 563 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 HNRNPCL1O60812 293 aaKnown RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 PEX11AO75192 247 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 IL1BP01584 269 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 AMHP03971 560 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 PGAM1P18669 254 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 CPA2P48052 419 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 CLCNKBP51801 687 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 OCRLQ01968 901 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 STX3Q13277 289 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 CRYMQ14894 314 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 PAFAH1B3Q15102 231 aaKnown RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 HSF5Q4G112 596 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 STEAP4Q687X5 459 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 DSTYKQ6XUX3 929 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 CYS1Q717R9 158 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 GPRIN1Q7Z2K8 1008 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 OR52K1Q8NGK4 314 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 RSRC1Q96IZ7 334 aaKnown RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 SLC2A13Q96QE2 648 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 MKS1Q9NXB0 559 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 MIOSQ9NXC5 875 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 PPARGC1AQ9UBK2 798 aaKnown RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 SNX10Q9Y5X0 201 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 E2F8A0AVK6 867 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 GSC2O15499 205 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 ALDOAP04075 364 aaKnown RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 CNTFP26441 200 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 ELF1P32519 619 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 CACNA2D1P54289 1103 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 DPYSQ14117 519 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 FASTKD1Q53R41 847 aaKnown RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 N4BP2L1Q5TBK1 243 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 TIFABQ6ZNK6 161 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 MARK2Q7KZI7 788 aaKnown RBP11.51□□□□□ -0.57
CHMP3-209ENST00000494623 BNIPLQ7Z465 357 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 EDEM1Q92611 657 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 PCED1BQ96HM7 432 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 RILPQ96NA2 401 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 SMOQ99835 787 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 SYT15Q9BQS2 421 aa11.51□□□□□ -0.57
CHMP3-209ENST00000494623 TLE6Q9H808 572 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms