RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 HAPLN3Q96S86 360 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 SELENOSQ9BQE4 189 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 EPN3Q9H201 632 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 FBXO44Q9H4M3 255 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 RABEP2Q9H5N1 569 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 SLC27A5Q9Y2P5 690 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 SRRM3A6NNA2 597 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-225ENST00000494465 CPB1P15086 417 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 ATP5DP30049 168 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 RASA2Q15283 850 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 MANEALQ5VSG8 457 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 MSANTD2Q6P1R3 559 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 FOXR1Q6PIV2 292 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 DENND5BQ6ZUT9 1274 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 CCNYQ8ND76 341 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 ATXN2LQ8WWM7 1075 aaKnown RBP17.02■□□□□ 0.32
ATG4B-225ENST00000494465 CENPTQ96BT3 561 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 ZNF333Q96JL9 665 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 TTPALQ9BTX7 342 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 CEP41Q9BYV8 373 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 ACSS3Q9H6R3 686 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 CWH43Q9H720 699 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 PLAC1Q9HBJ0 212 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 GMIPQ9P107 970 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 FETUBQ9UGM5 382 aa17.02■□□□□ 0.32
ATG4B-225ENST00000494465 KCNU1A8MYU2 1149 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 POC1B-GALNT4F8VUJ3 575 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 OPHN1O60890 802 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 PAGE1O75459 146 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 UPP2O95045 317 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 CCR1P32246 355 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 PHBP35232 272 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 SEC24CP53992 1094 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 GALNT2Q10471 571 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 PPP2R5DQ14738 602 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 EFTUD2Q15029 972 aaKnown RBP eCLIP17.02■□□□□ 0.313e-7■■□□□ 14.3
ATG4B-225ENST00000494465 PRSS55Q6UWB4 352 aaPredicted RBP17.02■□□□□ 0.31
ATG4B-225ENST00000494465 PDZD4Q76G19 769 aaPredicted RBP17.02■□□□□ 0.31
ATG4B-225ENST00000494465 TADA2BQ86TJ2 420 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 PALM2Q8IXS6 379 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 ZNF567Q8N184 647 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 SPPL2BQ8TCT7 592 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 BCAS4Q8TDM0 211 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 FBF1Q8TES7 1133 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 DHRS4Q9BTZ2 278 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 VN1R3Q9BXE9 311 aa17.02■□□□□ 0.31
ATG4B-225ENST00000494465 PPIDQ08752 370 aaKnown RBP17.01■□□□□ 0.31
ATG4B-225ENST00000494465 ANKS3Q6ZW76 656 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 COLGALT1Q8NBJ5 622 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 SLC24A2Q9UI40 661 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 H7C4K7 107 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 NCAM2O15394 837 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 PIAS1O75925 651 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-225ENST00000494465 HOXC13P31276 330 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 FDFT1P37268 417 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 GRIA1P42261 906 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 TMED2Q15363 201 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 CNKSR3Q6P9H4 555 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 RNF168Q8IYW5 571 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-225ENST00000494465 DPF3Q92784 378 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 HDAC11Q96DB2 347 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 SLC39A13Q96H72 371 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 SIK2Q9H0K1 926 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 PPCSQ9HAB8 311 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 PPANQ9NQ55 473 aaKnown RBP17.01■□□□□ 0.31
ATG4B-225ENST00000494465 ATP11BQ9Y2G3 1177 aa17.01■□□□□ 0.31
ATG4B-225ENST00000494465 KCNK1O00180 336 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 ADAM12O43184 909 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 C1QAP02745 245 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 GEMIN4P57678 1058 aaKnown RBP17■□□□□ 0.31
ATG4B-225ENST00000494465 IKBKEQ14164 716 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 MPP2Q14168 576 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 SPATA17Q96L03 361 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 FCRL2Q96LA5 508 aaPredicted RBP17■□□□□ 0.31
ATG4B-225ENST00000494465 SERPINB11Q96P15 392 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 XPO6Q96QU8 1125 aaKnown RBP17■□□□□ 0.31
ATG4B-225ENST00000494465 SEPT10Q9P0V9 454 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 TCRBV9S1A1TA0A576 114 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 F5H423 210 aaPredicted RBP17■□□□□ 0.31
ATG4B-225ENST00000494465 SRGAP2BP0DMP2 458 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 PTPN3P26045 913 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 YWHAQP27348 245 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 GARSP41250 739 aaKnown RBP17■□□□□ 0.31
ATG4B-225ENST00000494465 SMARCB1Q12824 385 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 DUSP4Q13115 394 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 MGAT5BQ3V5L5 792 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 TRABD2AQ86V40 505 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 ARHGAP18Q8N392 663 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 DEPDC1BQ8WUY9 529 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 SIGLEC10Q96LC7 697 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 OXCT2Q9BYC2 517 aaPredicted RBP17■□□□□ 0.31
ATG4B-225ENST00000494465 TLR6Q9Y2C9 796 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 ACTL7BQ9Y614 415 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 CDY1Q9Y6F8 540 aa17■□□□□ 0.31
ATG4B-225ENST00000494465 DOCK4Q8N1I0 1966 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 TMEM120BA0PK00 339 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 STK10O94804 968 aaKnown RBP16.99■□□□□ 0.31
ATG4B-225ENST00000494465 PSMB4P28070 264 aa16.99■□□□□ 0.31
ATG4B-225ENST00000494465 SERPINB6P35237 376 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms