RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SDHAF4Q5VUM1 108 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 IZUMO3Q5VZ72 239 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 PSRC1Q6PGN9 363 aaPredicted RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 CYS1Q717R9 158 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 TMCO2Q7Z6W1 182 aaPredicted RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 TMEM150AQ86TG1 271 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 PRUNE1Q86TP1 453 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 NLRP14Q86W24 1093 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 SCN4BQ8IWT1 228 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 PPIL6Q8IXY8 311 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 FAM71DQ8N9W8 422 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 PDZD8Q8NEN9 1154 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 ADAM32Q8TC27 787 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 BADQ92934 168 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 HAUS1Q96CS2 278 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 HDAC11Q96DB2 347 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 TMEM169Q96HH4 297 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 GDAP1L1Q96MZ0 367 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 PGLYRP2Q96PD5 576 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 LRRC3Q9BY71 257 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 FRMD8Q9BZ67 464 aaPredicted RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 ROPN1BQ9BZX4 212 aaPredicted RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 TRIM31Q9BZY9 425 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 ROPN1Q9HAT0 212 aaPredicted RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 TMBIM4Q9HC24 238 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 EURLQ9NYK6 297 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 CXXC1Q9P0U4 656 aaPredicted RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 GMIPQ9P107 970 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 IGSF9Q9P2J2 1179 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 ASIC3Q9UHC3 531 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 STOML2Q9UJZ1 356 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 HBS1LQ9Y450 684 aaKnown RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 ALPK3Q96L96 1907 aa7□□□□□ -1.29
MSH5-217ENST00000494458 SGK1O00141 431 aa7□□□□□ -1.29
MSH5-217ENST00000494458 EEF2KO00418 725 aaKnown RBP7□□□□□ -1.29
MSH5-217ENST00000494458 TEX28O15482 410 aa7□□□□□ -1.29
MSH5-217ENST00000494458 HRO43593 1189 aa7□□□□□ -1.29
MSH5-217ENST00000494458 MFSD11O43934 449 aa7□□□□□ -1.29
MSH5-217ENST00000494458 OPA1O60313 960 aa7□□□□□ -1.29
MSH5-217ENST00000494458 GREM1O60565 184 aa7□□□□□ -1.29
MSH5-217ENST00000494458 SOAT2O75908 522 aa7□□□□□ -1.29
MSH5-217ENST00000494458 FGF18O76093 207 aa7□□□□□ -1.29
MSH5-217ENST00000494458 OLFM2O95897 454 aa7□□□□□ -1.29
MSH5-217ENST00000494458 OAS1P00973 400 aaKnown RBP7□□□□□ -1.29
MSH5-217ENST00000494458 F11P03951 625 aa7□□□□□ -1.29
MSH5-217ENST00000494458 NUDT7P0C024 238 aa7□□□□□ -1.29
MSH5-217ENST00000494458 VAV1P15498 845 aa7□□□□□ -1.29
MSH5-217ENST00000494458 RPL17P18621 184 aaKnown RBP7□□□□□ -1.29
MSH5-217ENST00000494458 TPSB2P20231 275 aa7□□□□□ -1.29
MSH5-217ENST00000494458 MX2P20592 715 aa7□□□□□ -1.29
MSH5-217ENST00000494458 BMPR1AP36894 532 aa7□□□□□ -1.29
MSH5-217ENST00000494458 CDR1P51861 262 aa7□□□□□ -1.29
MSH5-217ENST00000494458 FAM193AP78312 1265 aa7□□□□□ -1.29
MSH5-217ENST00000494458 CDK16Q00536 496 aa7□□□□□ -1.29
MSH5-217ENST00000494458 UBE3AQ05086 875 aa7□□□□□ -1.29
MSH5-217ENST00000494458 ZNF844Q08AG5 666 aa7□□□□□ -1.29
MSH5-217ENST00000494458 GPS2Q13227 327 aa7□□□□□ -1.29
MSH5-217ENST00000494458 SEMA5AQ13591 1074 aa7□□□□□ -1.29
MSH5-217ENST00000494458 SLC29A2Q14542 456 aa7□□□□□ -1.29
MSH5-217ENST00000494458 TRIP13Q15645 432 aaPredicted RBP7□□□□□ -1.29
MSH5-217ENST00000494458 TPSAB1Q15661 275 aa7□□□□□ -1.29
MSH5-217ENST00000494458 MGAT5BQ3V5L5 792 aa7□□□□□ -1.29
MSH5-217ENST00000494458 PIK3R6Q5UE93 754 aa7□□□□□ -1.29
MSH5-217ENST00000494458 DARS2Q6PI48 645 aaKnown RBP7□□□□□ -1.29
MSH5-217ENST00000494458 C1orf228Q6PIY5 440 aa7□□□□□ -1.29
MSH5-217ENST00000494458 PDZD4Q76G19 769 aaPredicted RBP7□□□□□ -1.29
MSH5-217ENST00000494458 OTOP2Q7RTS6 562 aa7□□□□□ -1.29
MSH5-217ENST00000494458 CROCCP2Q86T23 111 aa7□□□□□ -1.29
MSH5-217ENST00000494458 HERC6Q8IVU3 1022 aa7□□□□□ -1.29
MSH5-217ENST00000494458 CDKL3Q8IVW4 592 aaPredicted RBP7□□□□□ -1.29
MSH5-217ENST00000494458 ARHGAP12Q8IWW6 846 aa7□□□□□ -1.29
MSH5-217ENST00000494458 VPS52Q8N1B4 723 aa7□□□□□ -1.29
MSH5-217ENST00000494458 UMODL1-AS1Q8N2C9 162 aa7□□□□□ -1.29
MSH5-217ENST00000494458 FIBCD1Q8N539 461 aa7□□□□□ -1.29
MSH5-217ENST00000494458 TRAF3IP1Q8TDR0 691 aaPredicted RBP7□□□□□ -1.29
MSH5-217ENST00000494458 TFB1MQ8WVM0 346 aaKnown RBP7□□□□□ -1.29
MSH5-217ENST00000494458 HTR3CQ8WXA8 447 aa7□□□□□ -1.29
MSH5-217ENST00000494458 RSAD2Q8WXG1 361 aa7□□□□□ -1.29
MSH5-217ENST00000494458 FBXO32Q969P5 355 aa7□□□□□ -1.29
MSH5-217ENST00000494458 PSMG2Q969U7 264 aa7□□□□□ -1.29
MSH5-217ENST00000494458 PGM2Q96G03 612 aa7□□□□□ -1.29
MSH5-217ENST00000494458 BTN2A3PQ96KV6 586 aa7□□□□□ -1.29
MSH5-217ENST00000494458 CCDC114Q96M63 670 aa7□□□□□ -1.29
MSH5-217ENST00000494458 VAT1Q99536 393 aa7□□□□□ -1.29
MSH5-217ENST00000494458 EPAS1Q99814 870 aa7□□□□□ -1.29
MSH5-217ENST00000494458 WDR83Q9BRX9 315 aaKnown RBP7□□□□□ -1.29
MSH5-217ENST00000494458 CDC42EP4Q9H3Q1 356 aaKnown RBP7□□□□□ -1.29
MSH5-217ENST00000494458 PRDM12Q9H4Q4 367 aa7□□□□□ -1.29
MSH5-217ENST00000494458 C10orf88Q9H8K7 445 aa7□□□□□ -1.29
MSH5-217ENST00000494458 FAM204AQ9H8W3 233 aa7□□□□□ -1.29
MSH5-217ENST00000494458 IL21Q9HBE4 155 aa7□□□□□ -1.29
MSH5-217ENST00000494458 EIF2B3Q9NR50 452 aaKnown RBP7□□□□□ -1.29
MSH5-217ENST00000494458 MRPL17Q9NRX2 175 aaKnown RBP7□□□□□ -1.29
MSH5-217ENST00000494458 FETUBQ9UGM5 382 aa7□□□□□ -1.29
MSH5-217ENST00000494458 SFMBT1Q9UHJ3 866 aa7□□□□□ -1.29
MSH5-217ENST00000494458 PLAAQ9Y263 795 aa7□□□□□ -1.29
MSH5-217ENST00000494458 MFHAS1Q9Y4C4 1052 aa7□□□□□ -1.29
MSH5-217ENST00000494458 ASB3Q9Y575 518 aa7□□□□□ -1.29
MSH5-217ENST00000494458 PCDHB12Q9Y5F1 795 aa7□□□□□ -1.29
MSH5-217ENST00000494458 HS3ST4Q9Y661 456 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms