RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SLC38A8A6NNN8 435 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 LRRIQ3A6PVS8 624 aaPredicted RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 CHADO15335 359 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 LAMTOR5O43504 91 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 TACC1O75410 805 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 CLSTN1O94985 981 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 KIF20AO95235 890 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 SYPP08247 313 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 FAM163BP0C2L3 166 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 WARSP23381 471 aaKnown RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 BDNFP23560 247 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 CCNE1P24864 410 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 ATICP31939 592 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 AVPR1AP37288 418 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 KPNA1P52294 538 aaPredicted RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 PCBP3P57721 371 aaKnown RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 TNNC1P63316 161 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 TEKQ02763 1124 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 FCHO2Q0JRZ9 810 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 FZD5Q13467 585 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 BIRC3Q13489 604 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 MAPRE1Q15691 268 aaKnown RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 CFAP221Q4G0U5 840 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 ARHGAP29Q52LW3 1261 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 TXNDC8Q6A555 127 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 CRTC3Q6UUV7 619 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 RNF111Q6ZNA4 994 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 C4orf50Q6ZRC1 276 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 ASCL5Q7RTU5 278 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 CELF5Q8N6W0 485 aaKnown RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 ZNF513Q8N8E2 541 aaPredicted RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 TTC8Q8TAM2 541 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 PLEKHO2Q8TD55 490 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 BPIFB1Q8TDL5 484 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 MRPS31Q92665 395 aaKnown RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 NKD2Q969F2 451 aaPredicted RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 PCED1BQ96HM7 432 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 FUBP3Q96I24 572 aaKnown RBP eCLIP8.6□□□□□ -1.03
RIF1-211ENST00000494333 ZFYVE19Q96K21 471 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 TRIM55Q9BYV6 548 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 GOLPH3LQ9H4A5 285 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 NOL6Q9H6R4 1146 aaKnown RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 CRTAC1Q9NQ79 661 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 DMAC2Q9NW81 257 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 THG1LQ9NWX6 298 aaKnown RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 OBP2AQ9NY56 170 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 GTSE1Q9NYZ3 720 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 SLAMF8Q9P0V8 285 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 UXTQ9UBK9 157 aaPredicted RBP8.6□□□□□ -1.03
RIF1-211ENST00000494333 APEX2Q9UBZ4 518 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 TCFL5Q9UL49 500 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 GOLGA6L4A6NEF3 574 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 A8MXQ7 604 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 H0Y8X5 98 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 ARNTLO00327 626 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 CALUO43852 315 aaPredicted RBP8.59□□□□□ -1.03
RIF1-211ENST00000494333 PPM1BO75688 479 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 NOL4O94818 638 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 RHOBTB3O94955 611 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 PRAMEF12O95522 483 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 C4BPAP04003 597 aaKnown RBP8.59□□□□□ -1.03
RIF1-211ENST00000494333 NR3C1P04150 777 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 GSNP06396 782 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 SP9P0CG40 484 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 PTPN1P18031 435 aaKnown RBP8.59□□□□□ -1.03
RIF1-211ENST00000494333 DDX6P26196 483 aaKnown RBP eCLIP8.59□□□□□ -1.031e-8■■■□□ 17.3
RIF1-211ENST00000494333 MAGEA9P43362 315 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 MAGEA11P43364 429 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 RPS9P46781 194 aaKnown RBP8.59□□□□□ -1.03
RIF1-211ENST00000494333 AP3M2P53677 418 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 MLLT6P55198 1093 aaPredicted RBP8.59□□□□□ -1.03
RIF1-211ENST00000494333 CDH8P55286 799 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 DLG4P78352 724 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 CSTF1Q05048 431 aaKnown RBP8.59□□□□□ -1.03
RIF1-211ENST00000494333 VSTM1Q6UX27 236 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 MON1AQ86VX9 555 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 MAML2Q8IZL2 1156 aaPredicted RBP8.59□□□□□ -1.03
RIF1-211ENST00000494333 MYCBPAPQ8TBZ2 947 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 TMEM174Q8WUU8 243 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 USP13Q92995 863 aaPredicted RBP8.59□□□□□ -1.03
RIF1-211ENST00000494333 MYLPFQ96A32 169 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 SYAP1Q96A49 352 aaPredicted RBP8.59□□□□□ -1.03
RIF1-211ENST00000494333 CLDN23Q96B33 292 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 CCDC34Q96HJ3 373 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 ALPK1Q96QP1 1244 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 CYP2S1Q96SQ9 504 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 XYLT2Q9H1B5 865 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 C8orf33Q9H7E9 229 aaPredicted RBP8.59□□□□□ -1.03
RIF1-211ENST00000494333 LMAN1LQ9HAT1 526 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 GKN1Q9NS71 199 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 ADGRE2Q9UHX3 823 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 ZMYM5Q9UJ78 669 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 TRAF3IP3Q9Y228 551 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 FRMD4BQ9Y2L6 1034 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 NME7Q9Y5B8 376 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 R4GN57 208 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 WDFY4Q6ZS81 3184 aa8.59□□□□□ -1.03
RIF1-211ENST00000494333 ANK1P16157 1881 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 SSU72P8A0A1W2PR75 194 aa8.58□□□□□ -1.04
RIF1-211ENST00000494333 PRR23AA6NEV1 266 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms