RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 LUC7LQ9NQ29 371 aaKnown RBP12.9□□□□□ -0.34
TRA2A-209ENST00000494255 RBM12Q9NTZ6 932 aaKnown RBP12.9□□□□□ -0.34
TRA2A-209ENST00000494255 CTTNBP2NLQ9P2B4 639 aa12.9□□□□□ -0.34
TRA2A-209ENST00000494255 HS3ST4Q9Y661 456 aa12.9□□□□□ -0.34
TRA2A-209ENST00000494255 IPO7O95373 1038 aaKnown RBP12.89□□□□□ -0.35
TRA2A-209ENST00000494255 TMEM253P0C7T8 217 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 TNFRSF4P43489 277 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 SGSHP51688 502 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 GSDMDP57764 484 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 RPS24P62847 133 aaKnown RBP12.89□□□□□ -0.35
TRA2A-209ENST00000494255 OGDHQ02218 1023 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 FZD5Q13467 585 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 AUHQ13825 339 aaKnown RBP12.89□□□□□ -0.35
TRA2A-209ENST00000494255 SPA17Q15506 151 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 RAB6CQ53S08 254 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 FBXL22Q6P050 247 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 LRRC31Q6UY01 552 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 TERB1Q8NA31 727 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 DTWD2Q8NBA8 298 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 ARHGEF26Q96DR7 871 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 C1orf74Q96LT6 269 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 RPRD1AQ96P16 312 aaPredicted RBP12.89□□□□□ -0.35
TRA2A-209ENST00000494255 PRMT1Q99873 361 aaKnown RBP12.89□□□□□ -0.35
TRA2A-209ENST00000494255 PACSIN1Q9BY11 444 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 RAB6CQ9H0N0 254 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 DLGAP2Q9P1A6 1054 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 UVRAGQ9P2Y5 699 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 ANAPC7Q9UJX3 599 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 FBXO10Q9UK96 956 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 KMT2EQ8IZD2 1858 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 CISD3P0C7P0 127 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 FECHP22830 423 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 ADRA1BP35368 520 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 NUBP1P53384 320 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 CDH18Q13634 790 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
TRA2A-209ENST00000494255 ACAP1Q15027 740 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 SLFN11Q7Z7L1 901 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 MFN1Q8IWA4 741 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 CFAP52Q8N1V2 620 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 CARNMT1Q8N4J0 409 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 ZNF564Q8TBZ8 553 aaPredicted RBP12.89□□□□□ -0.35
TRA2A-209ENST00000494255 NTAN1Q96AB6 310 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 BAG1Q99933 345 aaPredicted RBP12.89□□□□□ -0.35
TRA2A-209ENST00000494255 TRIM7Q9C029 511 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 TMPRSS4Q9NRS4 437 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 IP6K2Q9UHH9 426 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 INTUQ9ULD6 942 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 VANGL2Q9ULK5 521 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 SLC27A6Q9Y2P4 619 aa12.89□□□□□ -0.35
TRA2A-209ENST00000494255 A0A0A0MRY4 1105 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 A0A1B0GVM2 712 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 TCAF2A6NFQ2 919 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 H0Y626 953 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 MYO1FO00160 1098 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 TRIM24O15164 1050 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 ATG13O75143 517 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 RNF40O75150 1001 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 GGCXP38435 758 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 AIF1P55008 147 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 SEC13P55735 322 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 MESP2Q0VG99 397 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 EFHC2Q5JST6 749 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 ANKS1BQ7Z6G8 1248 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 CCDC185Q8N715 623 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 WFIKKN2Q8TEU8 576 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 MYEOVQ96EZ4 313 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 P2RY11Q96G91 374 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 ANLNQ9NQW6 1124 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 SPATA6Q9NWH7 488 aaPredicted RBP12.88□□□□□ -0.35
TRA2A-209ENST00000494255 LCMT1Q9UIC8 334 aa12.88□□□□□ -0.35
TRA2A-209ENST00000494255 TRIOO75962 3097 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 SOWAHDA6NJG2 315 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 EIF3CLB5ME19 914 aaKnown RBP12.87□□□□□ -0.35
TRA2A-209ENST00000494255 I6L893 689 aaPredicted RBP12.87□□□□□ -0.35
TRA2A-209ENST00000494255 K7EQS6 105 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 PRPSAP2O60256 369 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 SRGAP2O75044 1071 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 LUC7L3O95232 432 aaKnown RBP12.87□□□□□ -0.35
TRA2A-209ENST00000494255 NDUFA10O95299 355 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 MAGEA1P43355 309 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 ZNF252P-AS1Q0IIN9 211 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 E2F5Q15329 346 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 RNF43Q68DV7 783 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 Q6ZS52 159 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 C14orf80Q86SX3 495 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 RHOT2Q8IXI1 618 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 SPEM1Q8N4L4 309 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 FIBINQ8TAL6 211 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 UCMAQ8WVF2 138 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 ANP32BQ92688 251 aaKnown RBP12.87□□□□□ -0.35
TRA2A-209ENST00000494255 EZH1Q92800 747 aaPredicted RBP12.87□□□□□ -0.35
TRA2A-209ENST00000494255 IGSF8Q969P0 613 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 ACDQ96AP0 544 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 EIF3CQ99613 913 aaKnown RBP12.87□□□□□ -0.35
TRA2A-209ENST00000494255 PRRX2Q99811 253 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 OSBPL2Q9H1P3 480 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 ABCB8Q9NUT2 735 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 OR12D3Q9UGF7 316 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms