RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 MYO16Q9Y6X6 1858 aa11.92□□□□□ -0.5
LRTM1-202ENST00000493075 C4orf47A7E2U8 309 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 KCNU1A8MYU2 1149 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 KCNJ18B7U540 433 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 CDX4O14627 284 aaPredicted RBP11.91□□□□□ -0.5
LRTM1-202ENST00000493075 HSF2BPO75031 334 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 NDUFS2O75306 463 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 APOEP02649 317 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 EPHX1P07099 455 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 SERPINF2P08697 491 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 POLR2EP19388 210 aaKnown RBP11.91□□□□□ -0.5
LRTM1-202ENST00000493075 PRKCHP24723 683 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 CD70P32970 193 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 KCNJ12Q14500 433 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 DRAP1Q14919 205 aaPredicted RBP11.91□□□□□ -0.5
LRTM1-202ENST00000493075 TAF5Q15542 800 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 PTPRNQ16849 979 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 DCAF6Q58WW2 860 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 ZC3H12AQ5D1E8 599 aaKnown RBP11.91□□□□□ -0.5
LRTM1-202ENST00000493075 SYCP2LQ5T4T6 812 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 RBM43Q6ZSC3 357 aaKnown RBP11.91□□□□□ -0.5
LRTM1-202ENST00000493075 ARMCX6Q7L4S7 300 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 SLC47A2Q86VL8 602 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 SLC41A1Q8IVJ1 513 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 MFN1Q8IWA4 741 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 CCDC117Q8IWD4 279 aaPredicted RBP11.91□□□□□ -0.5
LRTM1-202ENST00000493075 DEFB106AQ8N104 65 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 ATP6V0D2Q8N8Y2 350 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 KDM1BQ8NB78 822 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 OR2T3Q8NH03 318 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 ADAM32Q8TC27 787 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 NUP58Q9BVL2 599 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 NAA15Q9BXJ9 866 aaKnown RBP11.91□□□□□ -0.5
LRTM1-202ENST00000493075 SLC6A17Q9H1V8 727 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 TMEM51Q9NW97 253 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
LRTM1-202ENST00000493075 CEP83Q9Y592 693 aa11.91□□□□□ -0.5
LRTM1-202ENST00000493075 ASLP04424 464 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 ACADMP11310 421 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 CCR1P32246 355 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 CDH5P33151 784 aaPredicted RBP11.9□□□□□ -0.5
LRTM1-202ENST00000493075 TPMTP51580 245 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 RPS24P62847 133 aaKnown RBP11.9□□□□□ -0.5
LRTM1-202ENST00000493075 SLC6A3Q01959 620 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 ZBTB16Q05516 673 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 ARID5BQ14865 1188 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 FNDC3BQ53EP0 1204 aaKnown RBP11.9□□□□□ -0.5
LRTM1-202ENST00000493075 WDR45BQ5MNZ6 344 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 SLC26A9Q7LBE3 791 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 DEFB119Q8N690 84 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 TMEM35BQ8NCS4 154 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 C1orf131Q8NDD1 294 aaKnown RBP11.9□□□□□ -0.5
LRTM1-202ENST00000493075 ZNF397Q8NF99 534 aaPredicted RBP11.9□□□□□ -0.5
LRTM1-202ENST00000493075 WFDC5Q8TCV5 224 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 CYB5D2Q8WUJ1 264 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 DNASE2BQ8WZ79 361 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 TOE1Q96GM8 510 aaKnown RBP11.9□□□□□ -0.5
LRTM1-202ENST00000493075 PRICKLE1Q96MT3 831 aaPredicted RBP11.9□□□□□ -0.5
LRTM1-202ENST00000493075 STK33Q9BYT3 514 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 NUCKS1Q9H1E3 243 aaKnown RBP11.9□□□□□ -0.5
LRTM1-202ENST00000493075 PCED1AQ9H1Q7 454 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 CAPN10Q9HC96 672 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 PLCB1Q9NQ66 1216 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 RRN3Q9NYV6 651 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 KIAA1522Q9P206 1035 aaPredicted RBP11.9□□□□□ -0.5
LRTM1-202ENST00000493075 STIM2Q9P246 746 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 TJP2Q9UDY2 1190 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 SUSD2Q9UGT4 822 aa11.9□□□□□ -0.5
LRTM1-202ENST00000493075 EML5Q05BV3 1969 aa11.9□□□□□ -0.51
LRTM1-202ENST00000493075 LUC7L3O95232 432 aaKnown RBP11.89□□□□□ -0.51
LRTM1-202ENST00000493075 KCNK5O95279 499 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 MOCS2O96007 188 aaPredicted RBP11.89□□□□□ -0.51
LRTM1-202ENST00000493075 UCHL3P15374 230 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 CYP11B1P15538 503 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 ENGP17813 658 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 CSRP1P21291 193 aaKnown RBP11.89□□□□□ -0.51
LRTM1-202ENST00000493075 ABCB4P21439 1286 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 TACR2P21452 398 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 NOS2P35228 1153 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 SCNN1AP37088 669 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 GABRB2P47870 512 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 GFPT1Q06210 699 aaPredicted RBP11.89□□□□□ -0.51
LRTM1-202ENST00000493075 SLC12A1Q13621 1099 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 HSP90AA4PQ58FG1 418 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 CDKAL1Q5VV42 579 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 OR6B2Q6IFH4 312 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 OLFML1Q6UWY5 402 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 PASD1Q8IV76 773 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 LGI2Q8N0V4 545 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 GPT2Q8TD30 523 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 ERLEC1Q96DZ1 483 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 MYEOVQ96EZ4 313 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 HSPA12BQ96MM6 686 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 PRMT1Q99873 361 aaKnown RBP11.89□□□□□ -0.51
LRTM1-202ENST00000493075 PRSS16Q9NQE7 514 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 XPO7Q9UIA9 1087 aaKnown RBP11.89□□□□□ -0.51
LRTM1-202ENST00000493075 INTS6Q9UL03 887 aaKnown RBP11.89□□□□□ -0.51
LRTM1-202ENST00000493075 DAAM1Q9Y4D1 1078 aa11.89□□□□□ -0.51
LRTM1-202ENST00000493075 METTL12A8MUP2 240 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms