RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 TMEM5Q9Y2B1 443 aa5.66□□□□□ -1.5
SND1-216ENST00000492840 USP15Q9Y4E8 981 aaPredicted RBP5.66□□□□□ -1.5
SND1-216ENST00000492840 CCDC7Q96M83 1385 aa5.66□□□□□ -1.5
SND1-216ENST00000492840 PPIP5K1Q6PFW1 1433 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 KIAA1551Q9HCM1 1747 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 LOC105369274A0A096LPK9 316 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 LOC102723532A0A0G2JNH3 316 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 MYOCOSA0A1B0GUC4 107 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 BICDL2A1A5D9 508 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 NPIPB15A6NHN6 443 aaPredicted RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 TSPAN4O14817 238 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 VILLO15195 856 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 TULP3O75386 442 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 ERAL1O75616 437 aaKnown RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 TUBB4AP04350 444 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 CSF1RP07333 972 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 NR2F1P10589 423 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 UQCRC1P31930 480 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 LBX1P52954 281 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 RARSP54136 660 aaKnown RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 FAM3BP58499 235 aaPredicted RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 ZNF844Q08AG5 666 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 RIN1Q13671 783 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 RNF151Q2KHN1 245 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 P3H1Q32P28 736 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 TMEM196Q5HYL7 178 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 KIAA1614Q5VZ46 1190 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 DENND1BQ6P3S1 775 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 GET4Q7L5D6 327 aaPredicted RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 PRPF39Q86UA1 669 aaKnown RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 TEX11Q8IYF3 940 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 OR4N4Q8N0Y3 316 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 TBC1D5Q92609 795 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 FEM1CQ96JP0 617 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 ZBTB45Q96K62 511 aaPredicted RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 PRAM1Q96QH2 718 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 TCF25Q9BQ70 676 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 PTDSS2Q9BVG9 487 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 INTS2Q9H0H0 1204 aaKnown RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 TMEM168Q9H0V1 697 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 RETREG1Q9H6L5 497 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 ERVK-5Q9HDB9 667 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 SLC25A10Q9UBX3 287 aaPredicted RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 ZHX1Q9UKY1 873 aaPredicted RBP5.65□□□□□ -1.5
SND1-216ENST00000492840 RIMKLBQ9ULI2 386 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 SLC27A6Q9Y2P4 619 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 NR2E1Q9Y466 385 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 PMF1-BGLAPU3KQ54 211 aa5.65□□□□□ -1.5
SND1-216ENST00000492840 KIF13BQ9NQT8 1826 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 SLIT3O75094 1523 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 C5P01031 1676 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 CCDC195A0A1B0GUA6 201 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 PTGES3LE9PB15 166 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 M0QYT0 321 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 CTIFO43310 598 aaKnown RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 TNFSF14O43557 240 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 PEX10O60683 326 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 ADAMTS4O75173 837 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 BEST1O76090 585 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 HSPA4LO95757 839 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 ALADP13716 330 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 GCSHP23434 173 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 PPIFP30405 207 aaKnown RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 NNMTP40261 264 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 PNPLA4P41247 253 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 GATMP50440 423 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 TBL3Q12788 808 aaKnown RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 EPS8Q12929 822 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 CCNIQ14094 377 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 ACOX1Q15067 660 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 ZNF569Q5MCW4 686 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 ARHGAP40Q5TG30 622 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 MCTP2Q6DN12 878 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 RGS7BPQ6MZT1 257 aaPredicted RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 EFCAB12Q6NXP0 572 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 IKBIPQ70UQ0 350 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 GALNT13Q8IUC8 556 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 SLC15A3Q8IY34 581 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 FSTL5Q8N475 847 aaPredicted RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 KLHL36Q8N4N3 616 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 PTGR2Q8N8N7 351 aaPredicted RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 ZCCHC10Q8TBK6 192 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 ELP4Q96EB1 424 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 REXO5Q96IC2 774 aaKnown RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 LENG8Q96PV6 779 aaPredicted RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 PPP1R10Q96QC0 940 aaKnown RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 NR1H4Q96RI1 486 aaPredicted RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 ADPGKQ9BRR6 497 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 RANBP17Q9H2T7 1088 aaKnown RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 TTYH1Q9H313 450 aaPredicted RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 VEZTQ9HBM0 779 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 SEMA4BQ9NPR2 832 aaPredicted RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 PPP1R14DQ9NXH3 145 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 POGKQ9P215 609 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 NEU2Q9Y3R4 380 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 PCDHB7Q9Y5E2 793 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 LYVE1Q9Y5Y7 322 aa5.64□□□□□ -1.51
SND1-216ENST00000492840 VIRMAQ69YN4 1812 aaKnown RBP5.64□□□□□ -1.51
SND1-216ENST00000492840 ARFGEF1Q9Y6D6 1849 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms