RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 MAP3K13O43283 966 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 ACSL4O60488 711 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 IGLV3-25P01717 112 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 TPM1P09493 284 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 CD70P32970 193 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 CLCN1P35523 988 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 COPAP53621 1224 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 PTPRNQ16849 979 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 PPM1JQ5JR12 505 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 SPDYCQ5MJ68 293 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 PEAR1Q5VY43 1037 aaPredicted RBP13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 NUGGCQ68CJ6 796 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 BEND5Q7L4P6 421 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 SLC41A1Q8IVJ1 513 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 DRC7Q8IY82 874 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 ZNF397Q8NF99 534 aaPredicted RBP13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 AZIN2Q96A70 460 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 CPXM1Q96SM3 734 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 EDEM2Q9BV94 578 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 GRPEL1Q9HAV7 217 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 ABCB8Q9NUT2 735 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 PILRBQ9UKJ0 227 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 TLR6Q9Y2C9 796 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 FHOD1Q9Y613 1164 aa13.18□□□□□ -0.3
SEC61A1-206ENST00000491668 ATXN2Q99700 1313 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 C4orf47A7E2U8 309 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 NPC1O15118 1278 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 AP5Z1O43299 807 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 MED7O43513 233 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 C7P10643 843 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 HLA-EP13747 358 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 ACADSBP45954 432 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 ZNF75DP51815 510 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 RPS24P62847 133 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 YWHAZP63104 245 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 RPL6Q02878 288 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 BYSLQ13895 437 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 GSE1Q14687 1217 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 DRAP1Q14919 205 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 MPP7Q5T2T1 576 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 SPECC1LQ69YQ0 1117 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 SLC47A2Q86VL8 602 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 SYT12Q8IV01 421 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 PASD1Q8IV76 773 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 UNC45BQ8IWX7 931 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 FAM71AQ8IYT1 594 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 CYB5D2Q8WUJ1 264 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 ANP32BQ92688 251 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 GOLGA1Q92805 767 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 FAM149B1Q96BN6 582 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 IQCDQ96DY2 449 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 STK33Q9BYT3 514 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 CIPCQ9C0C6 399 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 GANQ9H2C0 597 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 TMEM245Q9H330 911 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 PCDHGC3Q9UN70 934 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 AKAP13Q12802 2813 aa13.17□□□□□ -0.3
SEC61A1-206ENST00000491668 PCDH15Q96QU1 1955 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 ASCC3Q8N3C0 2202 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 KMT2BQ9UMN6 2715 aaPredicted RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 KHNYNO15037 678 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 EPHB6O15197 1021 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 SART1O43290 800 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 TIMM44O43615 452 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 TBL1XO60907 577 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 ADCY5O95622 1261 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 ADRB1P08588 477 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 PABPC1P11940 636 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 STAT1P42224 750 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 SLC11A2P49281 568 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 NNTQ13423 1086 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 TRIM14Q14142 442 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 ZC3H12AQ5D1E8 599 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 FSCBQ5H9T9 825 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 MS4A13Q5J8X5 152 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 LYSMD4Q5XG99 296 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 KIAA1324Q6UXG2 1013 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 CHST9Q7L1S5 443 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 TMC6Q7Z403 805 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 METTL3Q86U44 580 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 TMPRSS6Q8IU80 811 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 CFAP52Q8N1V2 620 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 ZNF366Q8N895 744 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 CPLX3Q8WVH0 158 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 ZNF419Q96HQ0 510 aaPredicted RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 MRFAP1L1Q96HT8 127 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 SERPINB11Q96P15 392 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 SLC2A13Q96QE2 648 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 NAA15Q9BXJ9 866 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 ADAM33Q9BZ11 813 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 LHX5Q9H2C1 402 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 PRDM16Q9HAZ2 1276 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 POPDC2Q9HBU9 364 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 FSCN3Q9NQT6 498 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 ITM2CQ9NQX7 267 aa13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 USP36Q9P275 1121 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-206ENST00000491668 EVLQ9UI08 416 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms