RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CD6P30203 668 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 HOXD12P35452 270 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 ANP32AP39687 249 aaKnown RBP18.67■□□□□ 0.58
HMGN1-219ENST00000491183 TPMTP51580 245 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 LMAN2Q12907 356 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 CAMK2GQ13555 558 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-219ENST00000491183 DUOXA1Q1HG43 343 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 FSCBQ5H9T9 825 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 DAB2IPQ5VWQ8 1189 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 SLC47A2Q86VL8 602 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 FAM71AQ8IYT1 594 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 DEFB106AQ8N104 65 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 ZNF366Q8N895 744 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 HJURPQ8NCD3 748 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-219ENST00000491183 PRCCQ92733 491 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-219ENST00000491183 TOE1Q96GM8 510 aaKnown RBP18.67■□□□□ 0.58
HMGN1-219ENST00000491183 DDX50Q9BQ39 737 aaKnown RBP18.67■□□□□ 0.58
HMGN1-219ENST00000491183 DACH1Q9UI36 760 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 INTS6Q9UL03 887 aaKnown RBP18.67■□□□□ 0.58
HMGN1-219ENST00000491183 SLC6A14Q9UN76 642 aa18.67■□□□□ 0.58
HMGN1-219ENST00000491183 CFIP05156 583 aa18.66■□□□□ 0.58
HMGN1-219ENST00000491183 DLDP09622 509 aaKnown RBP18.66■□□□□ 0.58
HMGN1-219ENST00000491183 POLR2EP19388 210 aaKnown RBP18.66■□□□□ 0.58
HMGN1-219ENST00000491183 FNDC3BQ53EP0 1204 aaKnown RBP18.66■□□□□ 0.58
HMGN1-219ENST00000491183 DCAF6Q58WW2 860 aa18.66■□□□□ 0.58
HMGN1-219ENST00000491183 MFN1Q8IWA4 741 aa18.66■□□□□ 0.58
HMGN1-219ENST00000491183 C1orf131Q8NDD1 294 aaKnown RBP18.66■□□□□ 0.58
HMGN1-219ENST00000491183 OR2T3Q8NH03 318 aa18.66■□□□□ 0.58
HMGN1-219ENST00000491183 TTC17Q96AE7 1141 aa18.66■□□□□ 0.58
HMGN1-219ENST00000491183 SLC2A13Q96QE2 648 aa18.66■□□□□ 0.58
HMGN1-219ENST00000491183 CAPN10Q9HC96 672 aa18.66■□□□□ 0.58
HMGN1-219ENST00000491183 PCDH15Q96QU1 1955 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 GIPC1O14908 333 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 IGLV3-19P01714 112 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 ERBB2P04626 1255 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 ATP5BP06576 529 aaKnown RBP18.65■□□□□ 0.58
HMGN1-219ENST00000491183 GLI1P08151 1106 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 SERPINF2P08697 491 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 C7P10643 843 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 MAOBP27338 520 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 MAPK8P45983 427 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 KCNJ12Q14500 433 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 DRAP1Q14919 205 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-219ENST00000491183 CT47A1Q5JQC4 288 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-219ENST00000491183 EFHC1Q5JVL4 640 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 RAP1GAP2Q684P5 730 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 MMS22LQ6ZRQ5 1243 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 FAM183BPQ6ZVS7 135 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 CACUL1Q86Y37 369 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 LGI2Q8N0V4 545 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 CARNMT1Q8N4J0 409 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 CEP76Q8TAP6 659 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 MYO19Q96H55 970 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 GPR174Q9BXC1 333 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 PLCB1Q9NQ66 1216 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 PRSS16Q9NQE7 514 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.65■□□□□ 0.58
HMGN1-219ENST00000491183 ASNSD1Q9NWL6 643 aa18.65■□□□□ 0.58
HMGN1-219ENST00000491183 ASCC3Q8N3C0 2202 aaKnown RBP18.65■□□□□ 0.58
HMGN1-219ENST00000491183 KCNU1A8MYU2 1149 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 GRAP2O75791 330 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 APOEP02649 317 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 TACR2P21452 398 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 KRT9P35527 623 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 CDK17Q00537 523 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 UAP1L1Q3KQV9 507 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 PTPN20Q4JDL3 420 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 TCP11X2Q5H9J9 407 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 KLHDC7AQ5VTJ3 777 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 OR6B2Q6IFH4 312 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 PSAPL1Q6NUJ1 521 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 OLFML1Q6UWY5 402 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 C11orf57Q6ZUT1 292 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-219ENST00000491183 RGL4Q8IZJ4 473 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 ZNF557Q8N988 423 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-219ENST00000491183 GPT2Q8TD30 523 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 BTN2A3PQ96KV6 586 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 PRMT1Q99873 361 aaKnown RBP18.64■□□□□ 0.57
HMGN1-219ENST00000491183 NAA15Q9BXJ9 866 aaKnown RBP18.64■□□□□ 0.57
HMGN1-219ENST00000491183 MTG2Q9H4K7 406 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 FHOD1Q9Y613 1164 aa18.64■□□□□ 0.57
HMGN1-219ENST00000491183 TYW5A2RUC4 315 aaKnown RBP18.63■□□□□ 0.57
HMGN1-219ENST00000491183 LUC7L3O95232 432 aaKnown RBP18.63■□□□□ 0.57
HMGN1-219ENST00000491183 ACADMP11310 421 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 OXTRP30559 389 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 CSKP41240 450 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 GFPT1Q06210 699 aaPredicted RBP18.63■□□□□ 0.57
HMGN1-219ENST00000491183 SYCP2LQ5T4T6 812 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 CHSY1Q86X52 802 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 ATP6V0D2Q8N8Y2 350 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 CADM4Q8NFZ8 388 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 ENOX1Q8TC92 643 aaKnown RBP18.63■□□□□ 0.57
HMGN1-219ENST00000491183 DNASE2BQ8WZ79 361 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 FOXJ1Q92949 421 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 MRGPRX3Q96LB0 322 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 CNTNAP3BQ96NU0 1288 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 NUP58Q9BVL2 599 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 CNTNAP3Q9BZ76 1288 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 DDIT4Q9NX09 232 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 SUN2Q9UH99 717 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms